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High-throughput profiling of diapause regulated genes from Trichogramma dendrolimi (Hymenoptera: Trichogrammatidae)


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- We compared transcriptomes of diapause and non-diapause T.
- Among them, 5702 genes were differentially expressed.
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- 1 Engineering Research Center of Natural Enemies, Institute of Biological Control, Jilin Agricultural University, Changchun 130118, China Full list of author information is available at the end of the article.
- After the completion of the diapause induction process, the parasitized host eggs were dissected to verify whether T.
- dendrolimi would remain in the prepupa stage.
- In this study, 99% of the parasitoids entered dia- pause successfully, and about 95% resumed development after the 70 d termination treatment.
- Of the transcripts were longer than 1000 bp (Table 2)..
- Nearly 25,000 annotated transcripts, over 65% of the annotated tran- scripts, were homologous to T.
- The tendencies of the expression profiles of these genes were similar according to RNA-Seq and qPCR (Fig.
- Among these 10 selected genes, all except trehalase (tre) were up-regulated during diapause..
- According to the Venn dia- gram, there were 463 genes changed throughout the dia- pause development process, while in the normal development process, the expression of these genes did not change (Fig.
- However, when we compared Dpre to Dp, there was little difference in the number of up- and down-regulated genes.
- The number of DEGs involved in ribosome biogenesis was much higher during diapause development than during normal development (Fig.
- Comparative analysis of genes involved in diapause Based on the results of GO enrichment, we focused on the genes enriched in the oxidation-reduction process, Table 1 Summary of Illumina transcriptome assembly for T.
- Table 2 General features of the de novo assembled transcriptome by Trinity.
- A total of 342 genes were identified in the oxidation- reduction process, and 16 of these belong to cytochrome P450s (CYP450s).
- In the T.
- In dia- pause stages (Dpre), 10 genes were up-regulated.
- In the pupae after diapause (Dp), five genes were highly expressed.
- There were 36 transcription factors differentially expressed during diapause development, and it appears that three kinds of transcription factors might be associ- ated with diapause in T.
- Zinc finger protein 271, zinc finger 184, and zinc finger 544, were identified in the transcriptome..
- The wee1 gene, encoding an inhibitory kinase, was up-regulated during diapause in N.
- In the transcriptome, 11 homeobox- containing genes were differentially expressed during diapause except for pit1, which was significantly up- regulated in the individuals that terminated diapause..
- And this gene may be in- volved in the regulation of cell proliferation, apoptosis, and embryonic development..
- In the heatmap graph, red indicates relatively high expression, green indicates relatively low expression, and black represents moderate expression.
- This result was consistent with that ob- tained in the cotton bollworm (Helicoverpa armigera)..
- Low PP2A expression in diapause individuals contribute to the accumulation of p-Akt, and p-Akt leads to H..
- In addition to these three biological processes, ribo- some biogenesis is also important in the control of cell growth and division in eukaryotes [39].
- All of the 60S ribosomal proteins were up-regulated (Fig.
- Some genes, even those not involved in the biological process, with a considerable number of genes enriched, appear to be important in the diapause development of T..
- gene 1 (pdrg1), which gene expressions were significantly changed during diapause development.
- Several studies have focused on the general gene expression pattern of insect diapause with- out a clear elucidation of the diapause mechanism.
- This is due to the complexity of the diapause process as well as the variations among insect species.
- In this study, several genes were identified related to diapause in T.
- There are four clans in the P450 supergene family namely CYP2, CYP3, CYP4, and Mitochondrion (Mito) [43].
- Ten GO items were selected according to the gene number of the four comparisons.
- The value of the horizontal ordinate represents the number of DEGs in each GO item.
- a Ten GO items according to the gene number of the comparison of Dpre vs NDpre.
- b Ten GO items according to the gene number of the comparison of Dp vs NDp.
- c Ten GO items according to the gene number of the comparison of Dpre vs Dp.
- d Ten GO items according to the gene number of the comparison of NDpre vs NDp.
- These genes were up-regulated in diapause individuals, sug- gesting that when T.
- 5 Cytochrome P450s (CYPs) genes selected in the T.
- ALL means all the unigenes of the T.
- 6 Speculated pattern diagram of zinc finger protein genes in the cell cycle.
- The expression of the wee1 gene is also shown in the histogram.
- box protein) differentially expressed during diapause de- velopment, which might be related to the diapause in T..
- One of the most noticeable characteristics of diapause is the blockage of ontogeny, and this blockage always occurs with cell cycle cessation [46, 47].
- vitripennis, the S phase of the cell cycle disappeared in the beginning stage of diapause due to the cells being arrested in the G0/G1 (stop cell division to the first gap) and G2 phases [48].
- Similarly, in the drosophilid fly, Chymomyza costata, the cell cycle of central nervous system (CNS) cells was arrested in the G0/G1 (86.6%) and G2 (12.8%) division phases during diapause [36].
- During embryogenesis in Tribolium castaneum, hth involved in the segmentation process and is required for specification of body wall identities in the thorax [49].
- Hth located in the head leads to opposite effects on eye and antennal development as a negative regulator of eye development, and it acts with extradenticle (exd) to delimit the eye field and prevent inappropriate eye de- velopment [50].
- In mam- mals, six1 is essential for early neurogenesis in the devel- opment of olfactory epithelium [52].
- They are important genes regulating myogenesis and highly up-regulated during diapause in T.
- PP2A plays a multi-faceted role in the regulation of several path- ways, such as the mTOR and the wnt signaling path- way, which are related to the cell cycle [53, 57]..
- 8 Lipid metabolism changes during diapause development.
- diapause in T.
- The specific functions of the genes involved in diapause required additional study..
- Some genes, even those not involved in the biological process, with a considerable number of genes enriched, appear to be important in the diapause development of T.
- It is speculated that more harmful substances were accumulated during diapause.
- UDPGT is important in the elimination of toxic xenobi- otics and endogenous compounds.
- GST belongs to a multifunctional protein family mainly located in the cyto- plasm.
- Genes related to lipid metabolism have important influ- ence in the formation of triacylglycerol, which is the main caloric reserve during diapause.
- Further studies are needed to elucidate the functions of candidate genes during diapause..
- dendrolimi were collected from a corn field in Yitong, Jilin Province, China (125°11′E, 43°3′N) in 2015..
- The RNA-seq raw reads were deposited as project number PRJNA597631 in the Sequence Read.
- Archive of the National Center for Biotechnology Infor- mation (NCBI).
- According to the results of GO en- richment analysis, candidate genes related to different stages during diapause development in T.
- Statis- tical analysis of the qPCR was conducted in SPSS 19.0 (SPSS Inc., Chicago, IL, USA).
- NDpre: Non-diapause prepupae.
- The funder of No.2017YFD0200400 was JJZ and he designed the research and preformed part of the research..
- The datasets generated and/or analysed during the current study are available in the Trichogramma dendrolimi Transcriptome repository (BioProject accession number PRJNA597631.
- Performance of four Chinese Trichogramma species as biocontrol agents of the rice striped stem borer, Chilo suppressalis, under various temperature and humidity regimes.
- The effects of temperature and host age on the fecundity of four Trichogramma species, egg parasitoids of the Cnaphalocrocis medinalis (Lepidoptera: Pyralidae).
- Molecular characterization of heat shock protein 90, 70 and 70 cognate cDNAs and their expression patterns during thermal stress and pupal diapause in the corn earworm.
- Reactive oxygen species extend insect life span using components of the insulin-signaling pathway..
- The history of the discovery of embryonic diapause in mammals.
- The role of latitudinal, genetic and temperature variation in the induction of diapause of Papilio glaucus (Lepidoptera: Papilionidae).
- Identification of FOXO targets that generate diverse features of the diapause phenotype in the mosquito Culex pipiens.
- TGF- β signaling regulates p-Akt levels via PP2A during diapause entry in the cotton bollworm, Helicoverpa armigera.
- PTEN expression responds to transcription factor POU and regulates p-AKT levels during diapause initiation in the cotton bollworm, Helicoverpa armigera.
- Advantages of diapause in Trichogramma dendrolimi mass production on eggs of the Chinese silkworm, Antheraea pernyi.
- Transcriptome and proteome analyses to investigate the molecular underpinnings of cold response in the Colorado potato beetle, Leptinotarsa decemlineata.
- Comparative transcriptome analysis reveals differentially expressed genes in the Asian citrus psyllid (Diaphorina citri) upon heat shock.
- Candidates for chemosensory genes identified in the Chinese citrus fly, Bactrocera minax, through a transcriptomic analysis.
- Transcriptome sequencing reveals potential mechanisms of the maternal effect on egg diapause induction of Locusta migratoria.
- Cell cycle arrest as a hallmark of insect diapause: changes in gene transcription during diapause induction in the drosophilid fly, Chymomyza Costata.
- Insulin signaling and FOXO regulate the overwintering diapause of the mosquito Culex pipiens.
- High expression of PP2A-A α is associated with diapause induction during the photoperiod-sensitive stage of the cotton bollworm, Helicoverpa armigera.
- Ribosome biogenesis: emerging evidence for a central role in the regulation of skeletal muscle mass.
- Transcript profiling reveals mechanisms for lipid conservation during diapause in the mosquito, Aedes albopictus.
- Diapause-associated changes in the lipid and metabolite profiles of the Asian tiger mosquito, Aedes albopictus.
- Cell cycle arrest in the jewel wasp Nasonia vitripennis in larval diapause.
- Homeotic genes of the Bithorax complex repress limb development in the abdomen of the Drosophila embryo through the target gene distal-less.
- Six1 is essential for early neurogenesis in the development of olfactory epithelium..
- PP2A as a master regulator of the cell cycle.
- Nueleolar size in parallel with ribosomal RNA synthesis at diapause termination in the eggs of Bombyx mori..
- The potential roles of the apoptosis-related protein PDRG1 in diapause embryo restarting of Artemia sinica

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