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Plant-pathogen interaction

Tìm thấy 13+ kết quả cho từ khóa "Plant-pathogen interaction"

Network analysis exposes core functions in major lifestyles of fungal and oomycete plant pathogens

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The battle in the apoplast: further insights into the roles of proteases and their inhibitors in plant-pathogen interactions. Signatures of host specialization and a recent transposable element burst in the dynamic one-speed genome of the fungal barley powdery mildew pathogen. Epigenetic control of effector gene expression in the plant pathogenic fungus Leptosphaeria maculans..

Dual species transcript profiling during the interaction between banana (Musa acuminata) and the fungal pathogen Fusarium oxysporum f. sp. cubense

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In previous researches, many banana plant genes related to defense-related pathways mainly including phenylpropanoid biosynthesis, phenylalanine metabol- ism, carbon metabolisms, amino acid recycling, hormone signal transduction and plant-pathogen interaction were greatly induced in the face of Foc TR4 [11–14].

Comparison of leaf transcriptome in response to Rhizoctonia solani infection between resistant and susceptible rice cultivars

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The KEGG pathway plant-pathogen interaction was sig- nificantly enriched in DEGs between JG-0 and JG-1. Table S3), similar to Sarowar et al. KEGG analysis of upregulated genes in YH-1 than JG-1 significantly enriched the plant-pathogen interaction pathway (Table 1). Undoubtedly, the entire plant-pathogen inter- action pathway showed a higher activation status in YH than JG after R.

Transcriptomic profiling of Solanum peruvianum LA3858 revealed a Mi-3- mediated hypersensitive response to Meloidogyne incognita

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In the “plant-pathogen interaction” pathway, the ex- pression levels of 2 genes that encode calcium- dependent protein kinases (CDPKs), 3 genes that encode. RPM1 and PRS2) and 2 genes that encode HSPs (HSP90s) were also upregulated in the plants grown at 25 °C soil temperature.

A dynamic degradome landscape on miRNAs and their predicted targets in sugarcane caused by Sporisorium scitamineum stress

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KEGG analysis showed that the dif- ferentially expressed predicted target genes involved in plant hormone signal transduction, plant-pathogen inter- actions, oxidative phosphorylation, and other disease-re- lated metabolic pathways, in which plant-pathogen interaction pathways appeared only in the differentially expressed predicted target genes of YC05–179, namely Sugarcane_Unigene_BMK.75694. scitamineum, the expression of Sugarcane_Unigene_BMK.75694 in YC05–179 was increased with the prolongation

Transcriptome analysis reveals gene responses to herbicide, tribenuron methyl, in Brassica napus L. during seed germination

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The genes en- coding CYP79F1, CYP83A1, CYP79B2, CYP79B3 and BCAT4, which are secondary metabolites that contribute to plant defense, were found in the glucosinolate. 6 Expression analysis of DEGs related to tribenuron-methyl in the four samples. the genes encoding MPK3 and CDPK were detected in the signal transduc- tion and plant-pathogen interaction pathways.

Effects of sugarcane aphid herbivory on transcriptional responses of resistant and susceptible sorghum

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It is noteworthy that in our study plant hor- mone signal transduction and glutathione metabolism pathways, both shown previously to be highly relevant to plant defense were only enriched in the 2-wk resistant genotype along with a plant-pathogen interaction pathway (Fig. In the susceptible. Aphids induced expression of genes in defense pathways in the 6-wk resistant genotype as well. However, the magnitude of these induc- tions was lower than in the younger sorghum (Fig.

Transcriptomic de novo analysis of pitaya (Hylocereus polyrhizus) canker disease caused by Neoscytalidium dimidiatum

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These unigenes play different roles in the plant-pathogen interaction pathways. Unige- ne13603_All and Unigene11517_All were annotated in the cyclic nucleotide-gated channel (CNGC) family, which mediates Ca 2+ influx from cellular stores in plants [19].. The CNGCs are reportedly Ca 2+ -permeable channels that interact with the ubiquitous Ca 2+ sensor calmodulin, and play important roles in the response to plant hormones, biotic and abiotic stresses, and plant immunity [20–22]..

Comprehensive analysis of the longan transcriptome reveals distinct regulatory programs during the floral transition

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For the DEG comparison between ‘SJ’ and ‘SX’ at T2, pathways of “plant-pathogen interaction” (corrected q-value genes), “plant hormone signal trans- duction” (corrected q-value genes), and “cir- cadian rhythm-plant” (corrected q-value genes) were significantly enriched. Finally, “plant hor- mone signal transduction” (corrected q-value genes) and “plant-pathogen interaction” (corrected q-value genes) were significantly enriched DEGs between ‘SJ’ and ‘SX’ at the T3 stage..

Genome-wide identification and characterization of long non-coding RNAs involved in the early somatic embryogenesis in Dimocarpus longan Lour

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Previous studies reported that the plant-pathogen interaction pathway was enriched in lncRNAs [46], miR- NAs [47, 48] and gene transcripts [23], which suggested the importance of plant-pathogen interactions in the embryonic developmental network in longan and other plants. In the KEGG enrichment results, it seemed that longan had begun to establish disease resist- ance mechanisms and other metabolic components based on hormones in the GE stage.

Comprehensive transcriptome analysis of grafting onto Artemisia scoparia W. to affect the aphid resistance of chrysanthemum (Chrysanthemum morifolium T.)

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Aphid infestation. 8 Heat map of the DEGs involved in plant-pathogen interaction. The third fully expanded leaves from the tip of the stem of the Cm / Cm and Cm / As plants were infested with twenty aphids (4 h of starvation) transferred by a soft brush.. The E-value threshold was set to 1E− 3 in the alignments to KOG.

De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)

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We also identified many dif- ferentially expressed unigenes that were significantly enriched in the DNA repair pathways. macclureana, and those that were enriched in the plant-pathogen interaction and DNA re- pair response pathways may be important for F. mac- clureana to cope with the new environment present in the lab. In the present study, we constructed a novel de novo transcriptome analysis for F.

Comparative transcriptome analysis reveals ecological adaption of cold tolerance in northward invasion of Alternanthera philoxeroides

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KEGG enrichment analysis according to the minimum Q value and the candidate gene number showed that transcripts involved in the MAPK signalling pathway (ko04016), plant-pathogen interaction (ko04626), ribosome (ko03010), starch and sucrose metabolism (ko00500), phe- nylpropanoid biosynthesis (ko00940), arginine and proline metabolism (ko00330), RNA transport (ko03013), oxida- tive phosphorylation (ko00190) and plant hormone signal transduction (ko04075) appeared to be the most import- ant pathways

Transcriptional reprogramming strategies and miRNA-mediated regulation networks of Taxus media induced into callus cells from tissues

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Among the pathways ob- served, “Plant–pathogen interaction” and “Plant hormone signal transduction” were the most enriched pathways reg- ulated by miRNAs. indeed, 77 and 59 DE degraded targets of pathogen interaction and plant hormone signal trans- duction were respectively detected in callus cells (Fig. In particular, pathways, such as “plant–. pathogen interaction” and “plant hormone signal trans- duction”, are the prior regulation targets of miRNAs..

Genome compartmentalization predates species divergence in the plant pathogen genus Zymoseptoria

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Genome compartmentalization predates species divergence in the plant pathogen genus Zymoseptoria. Full list of author information is available at the end of the article. The haploid genome of the reference isolate IPO323 comprises thirteen core and eight accessory chromosomes [23].

Transcriptomic analysis of genes in soybean in response to Peronospora manshurica infection

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In the plant pathogen interaction, three genes in JL1i vs. Except one calmodulin gene was down-regulated, all above mentioned DEGs in the pathways of phytohor- mone signal transduction and plant/pathogen interaction were up-regulated in both genotypes of HR and HS after inoculation with Pm (Table 2).. Of the total, 31, 11 and 10 DEGs were categorized into phytohormone signalling transduction, plant/pathogen interaction and TFs, respectively (Table 2)..

Comparative genomics and pangenomeoriented studies reveal high homogeneity of the agronomically relevant enterobacterial plant pathogen Dickeya solani

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Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222T.. Genome sequence of the emerging plant pathogen Dickeya solani strain RNS 08.23.3.. Estimating the size of the bacterial pan-genome.. Draft genome sequence of a highly virulent strain of the plant pathogen Dickeya solani, IFB0099.

Label free proteomics and systematic analysis of secretome reveals effector candidates regulated by SGE1 and FTF1 in the plant pathogen Fusarium oxysporum f. sp. cubense tropical race 4

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candidates regulated by SGE1 and FTF1 in the plant pathogen Fusarium oxysporum f.. Identification of new effectors is one of the research focuses in recent years. Results: Two transcription factors, SGE1 and FTF1, were constitutively over-expressed in Foc TR4 to partially mimic the in-planta state.

High genomic variability in the plant pathogenic bacterium Pectobacterium parmentieri deciphered from de novo assembled complete genomes

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Genome sequence of the plant pathogen Ralstonia solanacearum. https://doi.org a.. https://doi.org/10.1111/j.1574-6941.. Complete genome sequence of the potato pathogen Ralstonia. https://doi.org/10.1186/. https://doi.org . https://doi.org/10.3389/fpls . https://doi.org/10.1186/s . https://doi.org/10.1038/. Genome-based phylogeny and taxonomy of the ‘ Enterobacteriales. https://doi.org/10.1099/. https://doi.org/10.1016/j.nbt .

Comparative analysis of drought-responsive and -adaptive genes in Chinese wingnut (Pterocarya stenoptera C. DC)

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acids, tyrosine, and plant pathogen resistance, to cope with drought stress.