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Expression atlas

Tìm thấy 12+ kết quả cho từ khóa "Expression atlas"

A comprehensive RNA-Seq-based gene expression atlas of the summer squash (Cucurbita pepo) provides insights into fruit morphology and ripening mechanisms

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A comprehensive RNA-Seq-based gene expression atlas of the summer squash. Whole-genome sequencing of the Zuc- chini accession ‘BGV004370’ is the first reference gen- ome of summer squash [10]. A draft of the ‘True French’ Zucchini proteome is available [11], while RNA- seq technologies have been employed to study zucchini parthenocarpy [12].. The objective of the present study was to develop a Gene Expression Atlas (CupeGEA) for the C.

A transcriptomic and proteomic atlas of expression in the Nezara viridula (Heteroptera: Pentatomidae) midgut suggests the compartmentalization of xenobiotic metabolism and nutrient digestion

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FlyAtlas 2: a new version of the Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data. https://doi.org/. The salivary protein repertoire of the Polyphagous spider mite Tetranychus urticae : a quest for effectors. https://doi.org/10.1093/

Rust expression browser: An open source database for simultaneous analysis of host and pathogen gene expression profiles with expVIP

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Gene expression polymorphism underpins evasion of host immunity in an asexual lineage of the Irish potato famine pathogen. https://doi.org/10.1186/s . https://doi.org . doi.org/10.1186/s . https://doi.org/10.11 86/s . https://doi.org/10.1093/gbe/evx241.. https://doi.org/10.1093/nar/gkq1019.. Gene expression atlas at the European bioinformatics institute. https://doi.org/10.1093/nar/.

Sexual dimorphism and sex-biased gene expression in an egg parasitoid species, Anastatus disparis

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Profiling sex-biased gene expression during parthenogenetic reproduction in Daphnia pulex. microevolutionary divergence of sex-biased gene expression. comprehensive gene expression atlas of sex- and tissue-specificity in the malaria vector, Anopheles gambiae. Hyperexpression of the X chromosome in both sexes results in extensive female bias of X-linked genes in the flour beetle. Patterns of synonymous codon usage in Drosophila melanogaster genes with sex-biased expression.

Genome-wide identification and transcript analysis of TCP transcription factors in grapevine

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Tissue-specific expression patterns of VvTCP genes in grapevine. To gain more insights in potential roles of VvTCP genes during grapevine development, the organic- specific expression patterns of all the VvTCP genes were analysed using an expression atlas of V.

Genome-wide identification of GH3 genes in Brassica oleracea and identification of a promoter region for anther-specific expression of a GH3 gene

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When expression patterns of BoGH3 genes were probed at the organ level using EMBL-EBI expression atlas (https://www.ebi.ac.uk/gxa/experiments/E-GEOD-4289 1/Results), BoGH3.13–1 was found to be specifically expressed in floral buds, similar to our qRT-PCR results (Fig. However, expression levels of BoGH3.5–1 was found to be higher in silique than in floral bud, different from our results.

A single factor dominates the behavior of rhythmic genes in mouse organs

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Here, we aimed to determine whether a single major factor exists, that influences the expression of rhythmic genes. By investigating all rhythmically expressed genes in the circadian gene expression atlas [14], which to date is the largest circadian atlas for mouse, we have identified expression level as the key factor that dominates rhythmic gene expression. It explained the majority of variations in the circadian amplitude of cyclic genes in 12 mouse organs. 70% of the variation in amplitude.

Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

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This PRM gene expression atlas also features a fully searchable database of the entire genome assembly as well as incorporating a display of the Illumina gene expression data across the PRM 6 stages (egg, larvae, protonymph, deutonymph, adult male and adult female) as described here. Photographic images of the life stages at 1 week starvation are presented.

From methylglyoxal to pyruvate: A genome-wide study for the identification of glyoxalases and D-lactate dehydrogenases in Sorghum bicolor

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However, developmental stage mediated variations existed in the expression of SbGLYI-4, with its transcript levels being higher at the booting and dough stage of development (Fig. indicates absence of the corresponding residue and. Normalized and curated perturbation expression data (right panel) of the genes was retrieved from Expression Atlas.

A transcriptional landscape of 28 porcine tissues obtained by super deepSAGE sequencing

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A gene atlas of the mouse and human protein-encoding transcriptomes. A gene expression atlas of the domestic pig. JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. The AML1/ETO fusion protein blocks transactivation of the GM-CSF promoter by AML1B.. Lck and the nature of the T cell receptor trigger.

Intron and gene size expansion during nervous system evolution

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Transcript length mediates developmental timing of gene expression across Drosophila. Gene Length Matters in Neurons. an R package for interactive gene length dependent analysis for neuronal identity. Petryszak R, Keays M, Tang YA, Fonseca NA, Barrera E, Burdett T, et al.. Expression atlas update — an integrated database of gene and protein expression in humans, animals and plants. Papatheodorou I, Fonseca NA, Keays M, Tang YA, Barrera E, Bazant W, et al..

Multi-omics approach highlights differences between RLP classes in Arabidopsis thaliana

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As these 6 RLPs (RLP and 42) play important roles in the defence against various pathogens we will refer to them as VDRs (validated defence RLPs) in the remainder of this manuscript.. thali- ana reference genome, the gene expression atlas, an Arabidopsis transcriptome and proteome database, the sequencing data from the 1001 Arabidopsis genome pro- ject as well as a copy number variant atlas to gain a dee- per understanding of the function and putative role of the RLP family in Arabidopsis.

Atlas giải phẫu người

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ATLAS GIAI PHAU NGIIO I Ph;i'n ncji tl Jng NguiJi d;ch as Nguyi}n Kim LQc. NHA XUAT BAN Y HQC HA N n 2004 Coordinaitor: Colaborators: Reviewers: Mircea Ifrim Member of the Medical Science cademy Human natomy tlas Mircea frim Chen Feng Ifrim, Adrian Maghiar, Traian Maghiar, iscera I Acad. P5.1rascuta Translation into English - L.M.Roller Ifrim, Mircea Human Anatomy Atlas/Mircea Ifrim - Arad: Servo - Sal, 1999.

World Atlas - Địa lý

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World Atlas - Địa lýEbook cung cấp bản đồ tổng thể tự nhiên của thế giới 60 32.717Tải về Bài viết đã được lưu (adsbygoogle=window.adsbygoogle||[]).push({})Đây là một e-book tài liệu khá hay và bổ ích dành cho các bạn yêu thích môn Địa lý, các thầy cô giảng dạy bộ môn này hay chỉ đơn thuần là để tra cứu.

Xây dựng Atlas điện tử dân cư thành phố Hà Nội

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Quy trình xây dựng atlas điện tử dân cư thành phố Hà Nội. Để xây dựng atlas điện tử dân cư thành phố Hà Nội, chúng tôi hệ thống hóa, phân nhóm các chỉ tiêu cơ bản phản ánh đặc điểm chính về dân cư. Lập trình, kết nối các bản đồ số với nhau để tạo thành atlas điện tử Dân cư thành phố Hà Nội. Cụ thể, Atlas điện tử Dân cư thành phố Hà Nội được xây dựng theo quy trình sau:. Quy trình xây dựng atlas điện tử Dân cư thành phố Hà Nội.. Nội dung của Atlas điện tử Dân cư thành phố Hà Nội.

Virus expression detection reveals RNAsequencing contamination in TCGA

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Here we investigated the source(s) of viral contamination in The Cancer Genome Atlas (TCGA) pan- cancer RNA-seq dataset.

MethGET: Web-based bioinformatics software for correlating genome-wide DNA methylation and gene expression

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Putting DNA methylation in context: from genomes to gene expression in plants. DNA methylation: a form of epigenetic control of gene expression. On the presence and role of human gene-body DNA methylation. Divergence of gene body DNA methylation and evolution of plant duplicate genes. Correlation patterns between DNA methylation and gene expression in the Cancer genome atlas. Evolutionary transition of promoter and gene body DNA methylation across invertebrate – vertebrate boundary.

Insights into the skin of caecilian amphibians from gene expression profiles

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Variation trends in gene expression were detected between mid and posterior body skin suggesting different functions between body regions. Conclusions: Our study provides the first atlas of differentially expressed sequences in caecilian tissues and a baseline to explore the molecular basis of the skin functions in caecilian amphibians, and more broadly in vertebrates..

Gene expression profiles underlying aggressive behavior in the prefrontal cortex of cattle

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Therefore, IPA enables analysis of whether the patterns of expression observed in the DEG can be explained by the activation or inhibition of any of these regulators through an estimation of a z-score, a statistical measure of the match between the expected directional relationship between the regulator and its targets, based on observed gene expression [43]..

Wild mice with different social network sizes vary in brain gene expression

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Genome-wide atlas of gene expression in the adult mouse brain. Perturbed maintenance of transcriptional repression on the inactive X- chromosome in the mouse brain after Xist deletion