Tìm thấy 20+ kết quả cho từ khóa "Non-coding RNA"
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Long non-coding RNA five prime to X inactive spe- cific transcript (LncRNA) refers to a type of non-coding RNA with a molecular length of more than 200 nucleo- tides. Some long-chain non-coding RNAs were found that increased significantly in tumor tissues. It produces a long non-coding RNA splicing sequence, which can significantly up-regulate the expression of XIST.
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LINC E-10 1.32E-07. lncRNA Long non-coding RNAs. We then analyzed the function of the mRNAs in the co-expression module to determine the associated biological processes. Differnent expression long non-coding RNA. 0.10 0.05 qvalue. We constructed a multivariate Cox proportional hazard regression model for ccRCC in the training set based on 26 genomic stable state-related lncRNAs. The coefficients of the risk fac- tors in the model are shown in Table 2.
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Global analysis of small non-coding RNA populations across tissues in the malaria vector, Anopheles gambiae. Integrating RNA-seq and ChIP-seq data to characterize long non- coding RNAs in Drosophila melanogaster. Genome-wide identification of tissue- specific long non-coding RNA in three farm animal species. The novel long non-coding RNA CRG regulates Drosophila locomotor behavior.
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Long non-coding RNA PSMA3-AS1 promotes malignant phenotypes of esophageal cancer by modulating the miR-101/EZH2 axis AS a ceRNA. Long noncoding RNA CDKN2B-AS1 interacts with miR-411-3p to regulate ovarian cancer in vitro and in vivo through HIF-1a/VEGF/P38 pathway. HOXA10-AS: a novel oncogenic long non-coding RNA in glioma
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Several fil- tering steps were applied to screen lncRNAs in the transcript list by removing protein-coding transcripts, pseudogenes, and other classes of non-coding RNAs in- cluding ribosomal RNA (rRNA), microRNA (miRNA), transfer ribonucleic acid (tRNA). Expression profiling of lncRNAs and mRNAs. The proportion of significantly DE lncRNAs and mRNAs reflects their specific functions, and detailed lists of all genes are provided in Additional file 4.. Luo et al.
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Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome. Guttman M, et al. Ulitsky I, et al. Pauli A, et al. Tan MH, et al. RNA sequencing reveals a diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development. Tupy JL, et al. Young RS, et al. Liu J, et al. Broadbent KM, et al. Li T, et al. Li A, et al. Chodroff RA, et al. Necsulea A, et al. Muret K, et al. Zhang T, et al. Billerey C, et al. Koufariotis LT, et al.
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Long non-coding RNA SOX2OT.. Jiang H-p, Gao B-b, Li W-h, et al. Zhai R, Feng Y, Wang H, et al
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These lncRNAs were assigned, depending on their position relative to annotated genes, to “MSC- related long intergenic non-coding RNAs” named “Mlinc”, and to “MSC-related long overlapping antisense RNAs”. Of these, 34712 were found to be intergenic and were thus referred to as “Mlinc” RNAs, and 38751 were found to overlap with coding regions but in anti-sense orientation and thus referred to as “Mloanc” RNAs (with criteria described as in “Methods” section and Fig.
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The present work investigated the dynamic changes of mRNAs, miRNAs, circRNAs and lncRNAs, and their interactions in response to topping treatment in tobacco, with a focus on coding and non- coding RNAs related to nicotine biosynthesis. Our re- sults provide evidence for the involvement of ncRNAs and their interactions with coding genes in nicotine bio- synthesis and the foundation for further functional characterization of the networks involving both coding and non-coding RNAs in tobacco..
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Transcriptome-wide N6-methyladenosine modification profiling of long non-coding RNAs during replication of Marek ’ s disease virus in vitro. Long non-coding RNAs (lncRNAs) participate in Marek ’ s disease virus (MDV) replication but how m 6 A modifications in lncRNAs are affected during MDV infection is currently unknown. We report for the first time profiling of the alterations in transcriptome-wide m 6 A modification in lncRNAs of MDV-infected CEF cells..
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Function and evolution of the long noncoding RNA circuitry orchestrating X-chromosome inactivation in mammals. Long non-coding RNAs in the regulation of the immune response. lincRNAs act in the circuitry controlling pluripotency and differentiation.. Super-Enhancers in the Control of Cell Identity and Disease. Transcription of the non-coding RNA upperhand controls Hand2 expression and heart development. The accessible chromatin landscape of the human genome.
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Long non-coding RNAs have age- dependent diurnal expression that coincides with age-related changes in. Background: Disrupted diurnal rhythms cause accelerated aging and an increased incidence in age-related disease and morbidity. The goal of this study is to further understand the mechanism of age-related changes to circadian chromatin with a focus on facultative heterochromatin and diurnal non-coding RNAs..
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Genome-wide identification and functional prediction of long non-coding RNAs involved in the heat stress response in Metarhizium robertsii. Characteristics of long non-coding RNAs in the Brown Norway rat and alterations in the Dahl salt-sensitive rat. Non-coding RNAs turn up the heat: an emerging layer of novel regulators in the mammalian heat shock response. Immobilization of proteins in the nucleolus by ribosomal intergenic spacer noncoding RNA.
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Long non-coding RNA OIP5-AS1. inflammation and cell apoptosis via regulating the miR-26a-5p/TLR4 axis. Moreover, miR-26a-5p was confirmed to target TLR4 according to results of luciferase reporter assay. In addition, miR-26a-5p overexpression decreased the contents of proinflammatory factors and inhibited cell apoptosis, while upregulation of TLR4 reversed these effects of miR-26a-5p mimics, implying that miR-26a-5p alleviated ALI by regulat- ing TLR4.
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Systematic Analysis of Non-coding RNAs Involved in the Angora Rabbit (Oryctolagus cuniculus) Hair Follicle Cycle by RNA Sequencing. The seasonal development dynamics of the yak hair cycle transcriptome. Systematic analysis of long noncoding RNAs in the senescence-accelerated mouse prone 8 brain using RNA sequencing. Comparative expression dynamics of Intergenic long noncoding RNAs in the genus drosophila. Whales originated from aquatic artiodactyls in the Eocene epoch of India
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Identification and characterization of a novel nuclear noncoding RNA, Fben-1, which is preferentially expressed in the. Systematic Identification and Characterization of Long Non-Coding RNAs in the Silkworm, Bombyx mori. BmncRNAdb: a comprehensive database of non-coding RNAs in the silkworm, Bombyx mori. Identification and comparison of long non-coding RNAs in the silk gland between domestic and wild silkworms.
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Long non-coding RNAs potentially function synergistically in the cellular. A total of 7009 mouse polyadenylation lncRNAs (including 5204 novel lncRNAs) were obtained, and a comprehensive analysis of in vivo and SCNT mouse pre-implantation embryo lncRNAs was further performed based on our single-cell RNA sequencing data.
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In this study, the sequencing of long non-coding RNA libraries constructed from cotton fiber development stages of Ligon-lintless-1 and wild-type was done. The functional prediction of long noncoding RNAs (LncRNAs) and their expressions as involved in cotton fiber development were examined.
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We profiled the ncRNAs (non-coding RNA) present in the EVs from seven dairy products - raw whole milk, heat-treated skim milk, homogenized heat-treated skim milk, pasteurized homogenized skim milk, pasteurized heavy whipping cream, sweet cream buttermilk and cultured buttermilk with four replicates each, obtained at different processing steps from a commercial dairy plant.
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Differential expression analysis of lncRNAs and mRNAs For each sample, FPKM was a normalized estimation of both mRNA and lncRNA based on RNA-seq data.. Correlation degrees of lncRNAs and mRNAs were calculated by counting their correlated counter- parts. PRRSV: Porcine reproductive and respiratory syndrome virus. Single-cell analysis of long non- coding RNAs in the developing human neocortex.