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Stress response

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Identification of long noncoding natural antisense transcripts (lncNATs) correlated with drought stress response in wild rice (Oryza nivara)

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However, the contribution of lncNATs to drought stress response in wild rice remains largely unknown.. nivara accessions (BJ89 and BJ278) to determine the role of lncNATs in drought stress response in wild rice.. Of the 1091 coding – noncoding NAT pairs, 240 were differentially expressed between control and drought stress conditions. Conclusion: We identified lncNATs associated with drought stress response in cultivated rice and O.

Comprehensive analysis of NAC transcription factor family uncovers drought and salinity stress response in pearl millet (Pennisetum glaucum)

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Comprehensive analysis of NAC. transcription factor family uncovers drought and salinity stress response in pearl millet (Pennisetum glaucum). Background: Pearl millet (Pennisetum glaucum) is a cereal crop that possesses the ability to withstand drought, salinity and high temperature stresses.

Maize transposable elements contribute to long non-coding RNAs that are regulatory hubs for abiotic stress response

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Co-expression modules associated with stress responses Compared to coding genes and microRNAs, the function of lncRNAs in abiotic stress response remains largely Table 2 The proportion of base pairs attributable to different TE superfamilies based on the total length of inferred TE-lncRNAs and the B73 reference genome.

Deletion of the fungus specific protein phosphatase Z1 exaggerates the oxidative stress response in Candida albicans

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Analysis of the oxidative stress response of Penicillium chrysogenum to menadione. pH-responsive, posttranslational regulation of the Trk1 potassium transporter by the type 1-related Ppz1 phosphatase. Importance of the Candida albicans cell wall during commensalism and infection. Characterization of the gene family encoding alternative oxidase from Candida albicans. Characterization of the transcriptional response to cell wall stress in Saccharomyces cerevisiae. Control of the C

Integrated analysis of co-expression, conserved genes and gene families reveal core regulatory network of heat stress response in Cleistogenes songorica, a xerophyte perennial desert plant

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Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole- genome tiling arrays. Dynamics of the transcriptome response to heat in the Moss, Physcomitrella patens. Role of plant heat-shock proteins and molecular chaperones in the abiotic stress response. Functional analysis of an Arabidopsis heat-shock transcription factor HsfA3 in the transcriptional cascade downstream of the DREB2A stress-regulatory system

Genome-wide analysis of the serine carboxypeptidase-like protein family in Triticum aestivum reveals TaSCPL184-6D is involved in abiotic stress response

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Genome-wide analysis of the serine carboxypeptidase-like protein family in Triticum aestivum reveals TaSCPL184-6D is involved in abiotic stress response. Gene duplication analysis showed that ~ 10.5% and ~ 64.8% of the TaSCPL genes are derived from tandem and segmental duplication events, respectively. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/..

Functional characterization and regulatory mechanism of wheat CPK34 kinase in response to drought stress

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ABA is the most critical phytohormone in plant drought stress responses, and several plant CPKs are in- volved in the mechanisms of drought stress response through an ABA-dependent manner [43]. results, we propose that TaCPK34 functions in a signal transduction pathway that is involved in wheat response to drought stress (Fig.

Understanding the early cold response mechanism in IR64 indica rice variety through comparative transcriptome analysis

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Upregulation of these oxalate oxidases during cold stress response in our study agrees with the finding that ROS generation is induced as a primary abiotic stress response [70]. Various other cold stress response genes established by previous studies, such as OsTPP2 [73], OsTPS1 [74], OsPHS1 [75], were significantly up- regulated during cold 2 h shock in this study..

Genetic regulatory networks for salt-alkali stress in Gossypium hirsutum with differing morphological characteristics

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Alkali-salt stress response remains a cumbersome biological process and is regulated via a. Results: To discover the molecular mechanisms of alkali-salt stress response in cotton, a comprehensive transcriptome analysis was carried out after alkali-salt stress treatment in three accessions of Gossypium hirsutum with contrasting phenotype.

Genome-wide identification and transcript profiles of walnut heat stress transcription factor involved in abiotic stress

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Regulation of HSF1 function in the heat stress response, implications in aging and disease. Molecular mechanisms of the plant heat stress response. Progress on the function of heat shock transcription factors in plant abiotic stress tolerance. Ca 2+ and AtCaM 3 are involved in the expression of heat shock protein gene in Arabidopsis. The heat shock response in moss plants is regulated by specific calcium-permeable channels in the plasma membrane.

Stress-mediated convergence of splicing landscapes in male and female rock doves

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of gonadotropin-releasing hormone (GnRH is alternatively spliced in the male pituit- ary stress response.

Proteomic responses to progressive dehydration stress in leaves of chickpea seedlings

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Role of plant heat-shock proteins and molecular chaperones in the abiotic stress response. A proteomic study of the response to salinity and drought stress in an introgression strain of bread wheat

Transcriptome sequencing and whole genome expression profiling of hexaploid sweetpotato under salt stress

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RNA-Seq De Novo Assembly of Red Pitaya (Hylocereus polyrhizus) Roots and Differential Transcriptome Analysis in Response to Salt Stress. Transcriptome analysis of salt-stress response in three seedling tissues of common wheat.. A spatio-temporal understanding of growth regulation during the salt stress response in Arabidopsis. iTRAQ-Based Protein Profiling and Biochemical Analysis of Two Contrasting Rice Genotypes Revealed Their Differential Responses to Salt Stress.

BSR-Seq analysis provides insights into the cold stress response of Actinidia arguta F1 populations

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Cold acclimation is one of the most important mechanisms against low temperature stress in winter. The response of plants to low temperature is a highly complex process involving multiple levels of regulation [3]. The role of the starch metabolism path- way in plants under low temperature stress has been widely studied, and sugars accumulate rapidly in plants under low temperature [9].

Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus

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Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress. Structure/function analysis of a type III polyketide synthase in the brown alga Ectocarpus siliculosus reveals a biochemical pathway in phlorotannin monomer biosynthesis. Role of plant heat-shock proteins and molecular chaperones in the abiotic stress response.

Genome-wide survey of sucrose nonfermenting 1-related protein kinase 2 in Rosaceae and expression analysis of PbrSnRK2 in response to ABA stress

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Pivotal role of the AREB/ABF- SnRK2 pathway in ABRE-mediated transcription in response to osmotic stress in plants. Cloning and characterization of the SnRK2 gene family from Zea mays. Controlled nuclear import of the transcription factor NTL6 reveals a cytoplasmic role of SnRK2.8 in the drought-stress response. Genome-wide identification and characterization of the GmSnRK2 family in soybean.

Protein changes as robust signatures of fish chronic stress: A proteomics approach to fish welfare research

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Proteomics and the search for welfare and stress biomarkers in animal production in the one-health context. Habituation and individual variation in the endocrine stress response in the Trinidadian guppy (Poecilia reticulata). Consistency of stress response to repeated handling in the gilthead sea bream Sparus aurata Linnaeus, 1758. Species specificity in the magnitude and duration of the acute stress response in Mediterranean marine fish in culture.

High-throughput deep sequencing reveals the important role that microRNAs play in the salt response in sweet potato (Ipomoea batatas L.)

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VpSBP16 and BpSPL9 enhance salt and drought stress tolerance in Arabidopsis and Betula platyphylla, respectively [63, 64], indicating that miR156 may also participate in the salt stress response in sweet potato.

Integrated analysis of the responses of a circRNA-miRNA-mRNA ceRNA network to heat stress in rainbow trout (Oncorhynchus mykiss) liver

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Several important pathways involved in heat stress were characterized, such as protein. processing in the ER, the estrogen signaling pathway, and the HIF-1 signaling pathway.. Conclusions: These results extend our understanding of the molecular mechanisms of the heat stress response and provide novel insight for the development of strategies that relieve heat stress..

Genome-wide study of pineapple (Ananas comosus L.) bHLH transcription factors indicates that cryptochrome-interacting bHLH2 (AcCIB2) participates in flowering time regulation and abiotic stress response

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Besides, the functional characterization of AcbHLH8 (AcCIB2) shows the conserved functional role of bHLH genes in photo- morphogenesis and response abiotic stress. Overall, this study provides important information about the potential functions of the AcbHLHs, especially the AcCIB2 role in flowering, which is an essential trait for crop breeding.. The plated seeds were then kept for stratification in the dark at 4 °C for 48 h.