Có 40+ tài liệu thuộc chủ đề "miễn dịch gen"
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Prolonged high pH or heat exposure may lead to more contamination with genomic DNA (Liou et al., 1999) and nicked, open, and irreversibly denatured plasmid. Yashima et al., 1993a, b), triple helix resin, silica resin, and hydroxyapatite in a column as well as microtiter plate format. Plasmid purification procedures are reviewed in O’Kennedy et al. (2000), Neudecker and Grimm (2000),...
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Purification of supercoiled plasmid DNA using chromatographic processes. Down- stream processing of plasmid DNA for gene therapy and DNA vaccine applications (Review). Franken, J., and Luyten, B. A rapid and efficient procedure for the purification of DNA from agarose gels. Grimberg, J., Nawoschik, S., Belluscio, L., McKee, K., Turck, A., and Eisenberg, A. A simple and efficient non-organic procedure for...
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If samples are even slightly degraded, the quality of the data is severely compromised. For example, even a single cleavage in 20% of the target molecules will decrease the signal on a North- ern blot by 20%. Nuclease protection assays and RT-PCR analy- ses will tolerate partially degraded RNA without compromising the quantitative nature of the results.. Which Total RNA...
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Electrophoresis apparatus used for RNA analysis can be made RNase-free by filling with a 3% hydrogen peroxide solution, incu- bating for 10 minutes at room temperature and rinsing with DEPC-treated water.. When preparing RNase-free solutions, wear gloves and change them often. Regardless of the method used to prepare RNase-free solutions, keep in mind that they can easily become contaminated after...
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Chomczynski, P., and Sacchi, N. Fang, G., Hammar, S., and Grumet, R. H., Sninsky, J., and White, T., eds., PCR Protocols. Glisin,V., Crkvenjakov, R., and Byus, C. Kormanec, J., and Farkasovshy, M. Lin, R., Kim, D., Castanotto, D., Westaway, S., and Rossi, J. Rapley, R., and Manning, D. Reddy, K., and Gilman, M. C., Brambilla, D., Herman, S., Rosenstraus, M.,...
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What Insight Is Provided by a Restriction Enzyme’s Quality Control Data?. Restriction enzymes are isolated from bacterial strains that contain a variety of other enzyme activities required for normal cell function. These additional activities include other nucleases, phosphatases, and polymerases as well as other DNA binding pro- teins that may inhibit restriction enzyme activity. In preparations where trace amounts of...
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If the reaction produces extra fragments, possibly caused by star activity, reduce the reaction time or the amount of enzyme. If the reaction is incomplete, individually test each enzyme to determine it’s ability to linearize the plasmid. A lack of cutting may indicate an inactive enzyme, absence of the expected site, or inhibitors in the template preparation. If both enzymes...
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However, modifications in the recognition sequence of the binding protein can decrease the complex’s half-life, allowing unwanted methylation at the AC site.. The blocking reaction is followed by methylation, removal of the pyrim- idine oligonucleotide and methylase, and cleavage by the restric- tion endonuclease. An advantage of this method over the DNA binding protein AC is the increase in frequency...
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Fuchs, R., and Blakesley, R. Gardiner, K., Laas, W., and Patterson, D. Recognition sequence of the dam methylase of Escherichia coli K12 and mode of cleavage of Dpn I endonuclease. Gnirke, A., Huxley, C., Peterson, K., and Olson, M. Grimes, E., Koob, M., and Szybalski, W. Hanish, J., and McClelland, M. Enzymatic cleavage of a bacterial chromo- some at a...
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How Should You Prepare, Quantitate, and Adjust the pH of Small and Large Volumes of Nucleotides?. A dilution should be made to obtain a sample within the linear range of the spectrophotometer. Table 10.3 TLC Conditions to Monitor dNTP Degradation. Add 10 ml of concentrated NH 4 OH to 329 ml of water and mix with 661 ml of isobu-...
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is a good idea to consider performing control experiments when using a new lot of polymer for the first time.. What is the basic structure of a double-stranded polymer? Is it blunt ended? Will it have overhangs? How long are the over- hangs? There is no single answer to these questions due to the heterogeneous nature of the product and...
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You can see the differences between the pri- orities and needs of the two researchers.. Table 11.2a Priority List: Researcher 1. Long PCR product L. Table 11.2b Priority List: Researcher 2. After setting clear objectives of what your PCR reaction must accomplish, check that you have the adequate resources. Selecting one PCR strategy that optimally satisfies every research need is...
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especially important to adjust the primer concentration when the target sequence is rare or the template amount is low. too much primer will generate primer- dimers or smearing of the product visualized by agarose gel electrophoresis. For real-time PCR multiplex applications, it is recommended that a primer matrix study be performed (Table 11.6a,b) to ensure the limiting primer concen- tration...
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The T m of both primers should be similar to each other and similar to the primer-binding sites at the ends of the fragment to be amplified to achieve an optimal annealing temperature and amplification.. Table 11.9 compares commonly applied detection methods.. Is the target sequence absent?. Is the enzyme inactive?. Is the primer poorly designed?. Take a portion of...
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Faloona, F., Weiss, S., Ferre, F., and Mullis, K. High gain polymerase chain reaction. S, eds., PCR Primer: A Laboratory Manual. A simple polymerase chain reaction method for detection and cloning of low-abundance transcripts.. The design and optimization of the PCR. A., ed., PCR Technology. A., ed., PCR Technology.. A., ed., PCR Technol- ogy: Principles and Applications for DNA Amplification....
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What Are the Symptoms of Acrylamide Poisoning?. The initial symptoms of acrylamide poisoning on the skin are peeling of the skin at the point of contact, followed by tingling and numbness in the exposed area. If exposure by any means (touch, ingestion, inhalation) continues, muscular weakness, difficulty maintaining balance, and clumsiness in walking and in the use of the hands...
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WHICH GEL SHOULD YOU USE? SDS-PAGE, NATIVE PAGE OR ISOELECTRIC FOCUSING?. If you want to determine the molecular weight of your protein, use SDS-PAGE. Native PAGE is used to assay enzyme activity, or other biologi- cal activity, for example, during a purification procedure. Each kind of protein PAGE has issues to consider, and these issues are addressed in the next...
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Many non-ionic or zwitterionic detergents can be used for IEF or native PAGE to keep proteins soluble. CHAPS (3- [(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate) is most often used, as it is a very good solubilizer, and is nondena- turing. It should be used from 0.1% up to 4.0%. Another very effective solubilizer is SB 3-10 (decyldimethylammoniopropane- sulfonate), but it is denaturing (Rabilloud et al.,...
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How Do You Determine Molecular Weight on a Western Blot?. Use biotin-labeled molecular weight markers, and detect them with streptavidin-conjugated horseradish peroxidase or alkaline phosphatase. These markers will provide precise molecular weight values.. The pre-stained recombinant proteins of known, reproducible molecular weights discussed above can also determine the molecular weights of proteins on a blot.. Some researchers will cut off...
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After incubation with the sec- ondary reagent and washing, the blot is incubated with a substrate.. The enzyme catalyzes a reaction in which the substrate is con- verted to a colored precipitate directly on the membrane, essen- tially coloring the band on which the primary antibody has bound.. Those systems produc- ing extended light output have the advantage that several...