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Metabolic and transcriptome responses of RNAi-mediated AMPKα knockdown in Tribolium castaneum


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- Background: The AMP-activated protein kinase (AMPK) is an intracellular fuel sensor for lipid and glucose metabolism.
- In this study, RNA interference (RNAi) was conducted to investigate the effects of knockdown of TcAMPK α on lipid and carbohydrate metabolism in the red flour beetle, Tribolium castaneum, and the transcriptome profiles of dsTcAMPK α -injected and dsEGFP-injected beetles under normal conditions were compared by RNA- sequencing..
- Conclusions: AMPK plays a critical role in the regulation of beetle metabolism.
- The findings of DEGs involved in lipid and carbohydrate metabolism provide valuable insight into the role of AMPK signaling in the transcriptional regulation of insect metabolism..
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- AMP-activated protein kin- ase (AMPK) is a cellular energy sensor conserved across all eukaryotic species [13].
- As a serine/threonine protein kinase complex, AMPK consists of a catalytic subunit α and two regulatory subunits, β and γ, and is activated in response to energy stress by sensing increases in ADP/.
- While nucleotide- dependent phosphorylation of Thr172 in the α subunit by liver kinase B1 (LKB1) is the principal event required for full activation of AMPK in mammalian cells [19, 70], several studies have revealed the nucleotide-independent regulation of AMPK via the phosphorylation of Thr172 by calcium/calmodulin-dependent kinase kinase 2 in mammals (CAMKK .
- Although the role of AMPK in the regulation of cell metabolism is well studied in mammals, related research is still limited in insects.
- Notably, AMPK can regulate energy balance via modulation of transcriptional expres- sion of metabolic enzymes in the long term, however, its downstream transcriptional pathways remains largely elusive [7].
- Recently, we reported the transcriptional and post-translational activation of TcAMPKα by oxidative, heat and cold stresses in the red flour beetle, Tribolium castaneum [25].
- 8.61% (ANOVA, df 1, 4 , F = 7.917, P value when compared with the dsEGFP group mmol/mgprot) (Fig.
- (ANOVA, df 1, 4 , F = 8.196, P value was ob- served in the beetles injected with dsTcAMPKα μmol/g) when compared to the control beetles μmol/g) (Fig.
- 3.01% (ANOVA, df 1, 4 , F = 9.357, P value = 0.0377) than that in dsEGFP group mg/g) (Fig.
- (ANOVA, df 1, 4 , F = 10.770, P value and 41.89.
- 2.27% (ANOVA, df 1, 4 , F = 93.320, P value respectively, compared with injection buffer (IB).
- 4.02% (ANOVA, df 1, 4 , F = 8.910, P value = 0.0405) in beetles treated with AICAR.
- cas- taneum showed that 83.50 and 77.15% reads of the dsEGFP and dsTcAMPKα groups were aligned on aver- age, respectively (Table 2)..
- Similarly, among the 42 DEGs in the post- translational modification class, 35 DEGs were down- regulated, including 3 heat shock proteins (Hsps), whereas the phosphatidylinositol 4,5-bisphosphate 3- kinase (PIK3) and InR2 involved in the signal transduc- tion mechanisms were upregulated..
- Besides the analysis of the entire gene set, we specifically checked for up- or downregulation of lipid and carbohy- drate metabolism genes in our set of DEGs.
- ANOVA, df 1, 4 , F = 5.152, P value .
- TC015337 and TC015340) (Fold change: 2.03 and 3.22, ANOVA, df 1, 4 , F = 9.182 and 157.306, P value = 0.03878 and 0.00023) involved in fatty acid biosynthetic pathways, and the transcription factor ChREBP (Accession no..
- TC011996, TC034013 and TC010784) (Fold change and 2.46.
- ANOVA, df 1, 4 , F and 34.155, P value and .
- To confirm the reliability of the DEG Table 1 Summary of the transcriptome sequencing data from.
- TC011522, TC015400 and TC000238) (Fold change and 1.50;.
- ANOVA, df 1, 4 , F and 2.781, P value and 0.17070), one ACC (Accession no.
- TC015612) (Fold change: 1.77.
- ANOVA, df 1, 4 , F.
- 3 Correlation and box plot of the gene expression levels (FPKM) for all of the samples.
- A: Pearson correlations of gene expression levels of the six samples.
- B: Box plots of gene expression levels of the six samples..
- X-axis: log 2 -fold change (treatment/control).
- TC004512) (Fold change: 1.59.
- ANOVA, df 1, 4 , F = 8.092, P value four trehalase (TRE) genes responsible for trehalose hydrolysis (Accession no.
- TC006698, LOC659620, TC004791 and TC006697) (Fold change and 1.86.
- ANOVA, df 1, 4 , F and 9.491, P value and 0.03690), two genes involved in gluconeogenesis including pyruvate carboxylase (PC) (Accession no.
- TC032730) (Fold change: 1.73.
- ANOVA, df 1, 4 , F = 19.919, P value and phosphoenolpyr- uvate carboxykinase (PEPCK) (Accession no.
- TC009072) (Fold change: 1.23.
- ANOVA, df 1, 4 , F = 1.491, P value were significantly upregulated (Table 4).
- TC007163) (Fold change: 1.93;.
- ANOVA, df 1, 4 , F = 9.490, P value the master regulator of lipid homeostasis, and SREBP cleavage- activating protein (SCAP) (Accession no.
- TC013456) (Fold change: 1.75.
- These results were further confirmed by in vivo AICAR treatment, which resulted in the decreased TG and glucose levels and increased trehalose content.
- On the other hand, while activation of AMPK triggered a.
- 5 KOG function classifications of the differentially expressed unigenes.
- The X-axis represents names of 25 groups, and the Y-axis corresponds to the number of unigenes in the group.
- These results indicate the complexity of the role of AMPK in the regulation of metabolic processes..
- We also observed the upregula- tion of several carbohydrate metabolism-related genes, such as TRE, and two key enzymes in gluco- neogenesis (de novo synthesis of glucose), PC and PEPCK [16, 26], in the dsTcAMPKα-injected insects..
- SNF1A/AMP-activated protein kinase;.
- Fatty acid synthetase.
- FAS fatty acid synthase .
- IIS pathway was involved in the regulation of glucose and lipid metabolism (Saltie and Kahn 2001) [50].
- In this study, we observed the up- regulation of IIS-related DEGs like IRS1, InR2 and PI3K in dsTcAMPKα-injected beetles, which might result in the upregulation of SREBP1 and ChREBP.
- This study confirmed that AMPK has an important role in the regulation of beetle metabolism.
- 0.05 and fold change |log 2 (treatment/control.
- AMPK: AMP-activated protein kinase.
- FAS: fatty acid synthetase.
- The funding bodies played no role in the design of the study and collection, analysis, and interpretation of data and in writing the manuscript..
- Chitin synthases are required for survival, fecundity and egg hatch in the red flour beetle, Tribolium castaneum.
- AMP-activated protein kinase and its downstream transcriptional pathways.
- A common bicyclic protein kinase cascade inactivates the regulatory enzymes of fatty acid and cholesterol biosynthesis.
- The regulation of AMP-activated protein kinase by H 2 O 2 .
- Phosphorylation of the insulin receptor by AMP-activated protein kinase (AMPK) promotes ligand-independent activation of the insulin signalling pathway in rodent muscle.
- Status of malathion resistance in five genera of beetles infesting farm-stored corn, wheat, and oats in the United States.
- Regulation of phosphoenolpyruvate carboxykinase (GTP) gene expression.
- AMP-activated/SNF1 protein kinases: conserved guardians of cellular energy.
- Roles of the Snf1/Rkin1/AMP-activated protein kinase family in the response to environmental and nutritional stress.
- Complexes between the LKB1 tumor suppressor, STRAD α / β and MO25 α / β are upstream kinases in the AMP-activated protein kinase cascade.
- Calmodulin-dependent protein kinase kinase- β is an alternative upstream kinase for AMP-activated protein kinase.
- The Ca 2+ /calmodulin-dependent protein kinase kinases are AMP-activated protein kinase kinases.
- 5 ′ -AMP-activated protein kinase phosphorylates IRS-1 on Ser-789 in mouse C2C12 myotubes in response to 5-aminoimidazole-4-carboxamide riboside.
- Transcriptional and post-translational activation of AMPK α by oxidative, heat, and cold stresses in the red flour beetle, Tribolium castaneum.
- Mechanism for fatty acid “ sparing ” effect on glucose-induced transcription regulation of carbohydrate-responsive element-binding protein by AMP-activated protein kinase.
- dephosphorylation of the carbohydrate response element binding protein..
- Differential regulation of insulin receptor substrates-1 and-2 (IRS-1 and IRS-2) and phosphatidylinositol 3- kinase isoforms in liver and muscle of the obese diabetic (Ob/Ob) mouse.
- Functions of duplicated genes encoding CCAP receptors in the red flour beetle, Tribolium castaneum.
- The stimulation of glycolysis by hypoxia in activated monocytes is mediated by AMP-activated protein kinase and inducible 6-phosphofructo-2-kinase.
- Phosphorylation and activation of heart PFK-2 by AMPK has a role in the stimulation of glycolysis during ischaemia.
- Histochemical and ultrastructural studies of the mosquito Aedes aegypti fat body: effects of aging and diet type.
- AMP-activated kinase reciprocally regulates triacylglycerol synthesis and fatty acid oxidation in.
- Targeting the AMP-activated protein kinase for the treatment of type 2 diabetes.
- The transcriptional response of the yeast Na + -ATPase ENA1 gene to alkaline stress involves three main signaling pathways.
- AMP-activated protein kinase and metabolic regulation in cold-hardy insects.
- Insulin signalling and the regulation of glucose and lipid metabolism.
- AMP-activated protein kinase (AMPK) control of fatty acid and glucose metabolism in the ischemic heart.
- IGF-1 induces SREBP-1 expression and lipogenesis in SEB-1 sebocytes via activation of the phosphoinositide 3-kinase/Akt pathway.
- Complementary roles of IRS-1 and IRS-2 in the hepatic regulation of metabolism.
- AMP-activated protein kinase in metabolic control and insulin signaling.
- Glucose repression/derepression in budding yeast: SNF1 protein kinase is activated by phosphorylation under derepressing conditions, and this correlates with a high AMP: ATP ratio.
- Inactivation of acetyl-CoA carboxylase and activation of AMP-activated protein kinase in muscle during exercise.
- Ca 2+ /calmodulin-dependent protein kinase kinase- β acts upstream of AMP-activated protein kinase in mammalian cells.
- LKB1 is the upstream kinase in the AMP-activated protein kinase cascade.
- Juvenile hormone and insulin regulate trehalose homeostasis in the red flour beetle, Tribolium castaneum.
- Adiponectin stimulates glucose utilization and fatty- acid oxidation by activating AMP-activated protein kinase.
- Hypothalamic AMP-activated protein kinase regulates glucose production.
- AMP-activated protein kinase is required for the lipid-lowering effect of metformin in insulin-resistant human HepG2 cells.
- Role of AMP-activated protein kinase in mechanism of metformin action

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