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Genome-wide

Tìm thấy 14+ kết quả cho từ khóa "Genome-wide"

Heritability and genome-wide association analyses of fasting plasma glucose in Chinese adult twins

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A versatile gene-based test for genome-wide association studies

CNCC: An analysis tool to determine genome-wide DNA break end structure at single-nucleotide resolution

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DNA breaks and end resection measured genome-wide by end sequencing. BLISS is a versatile and quantitative method for genome-wide profiling of DNA double-strand breaks. Endogenous DNA double-strand breaks during DNA transactions: emerging insights and methods for genome-wide profiling

A fast-linear mixed model for genome-wide haplotype association analysis: Application to agronomic traits in maize

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Segmental duplications and copy-number variation in the human genome. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Gene and pathway-based second-wave analysis of genome- wide association studies. Variance component model to account for sample structure in genome-wide association studies. Mixed linear model approach adapted for genome-wide association studies. FaST linear mixed models for genome-wide association studies.

MethGET: Web-based bioinformatics software for correlating genome-wide DNA methylation and gene expression

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Correlation analyses of genome-wide DNA methylation and gene expression (correlation). To display the correlation between genome-wide DNA methylation and gene expression, MethGET generates scat- terplots and 2D kernel density plots. 2b that genes with lower expression are enriched in both high and low DNA methylation levels..

Ancestry-specific associations identified in genome-wide combined-phenotype study of red blood cell traits emphasize benefits of diversity in genomics

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A genome-wide association study of red blood cell traits using the electronic medical record. Kamatani Y, Matsuda K, Okada Y, Kubo M, Hosono N, Daigo Y, et al.. Genome-wide association study of hematological and biochemical traits in a Japanese population. Iotchkova V, Huang J, Morris JA, Jain D, Barbieri C, Walter K, et al. Hodonsky CJ, Jain D, Schick UM, Morrison JV, Brown L, McHugh CP, et al.. Genome-wide association study of red blood cell traits in Hispanics/Latinos:.

Genome-wide association studies for yield component traits in a macadamia breeding population

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Quality control for genome- wide association studies. Genome-wide association studies and genomic prediction. Overview of statistical methods for genome-wide association studies (GWAS). Bolormaa S, Pryce JE, Reverter A, Zhang Y, Barendse W, Kemper K, et al. Prediction of total genetic value using genome-wide dense marker maps

Genome-wide identification of microsatellite markers from cultivated peanut (Arachis hypogaea L.)

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However, there was limited reports on the development of a large number of genome-wide g- SSR markers from allotetraploid cultivated peanut because of the challenging in its genome sequencing. Here, large-scale genome-wide g-SSR markers were developed from the A.

Diploid genome differentiation conferred by RNA sequencing-based survey of genome-wide polymorphisms throughout homoeologous loci in Triticum and Aegilops

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genome-wide polymorphisms throughout homoeologous loci in Triticum and Aegilops. Background: Triticum and Aegilops diploid species have morphological and genetic diversity and are crucial genetic resources for wheat breeding. However, evaluations of genome differentiation based on genome- wide nucleotide variations are still limited, especially in the three genomes of the genus Aegilops: Ae.. (MM genome), and Ae.

Genome-wide identification of the contextdependent sRNA expression in Mycobacterium tuberculosis

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However, none of these genome-wide analyses focused on the conditional ex- pression of the sRNAs in different stress environments..

Genome-wide analysis of long non-coding RNAs in adult tissues of the melon fly, Zeugodacus cucurbitae (Coquillett)

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A chromosome-scale assembly of the Bactrocera cucurbitae genome provides insight to the genetic basis of white pupae.. Genome- wide gene expression profiling of the melon fly, Zeugodacus cucurbitae, during thirteen life stages. Long non-coding RNAs regulating immunity in insects. Non-coding RNA. Genome-wide characterization and developmental expression profiling of long non-coding RNAs in Sogatella furcifera. Non-coding RNAs: epigenetic regulators of bone development and homeostasis.

Genome-wide identification and expression analysis of the NAC transcription factor family in tomato (Solanum lycopersicum) during aluminum stress

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Genome- wide identification and expression analysis of the NAC transcription factor family in cassava. Tobacco transcription factors: novel insights into transcriptional regulation in the Solanaceae. Genome-wide analysis of NAC transcription factor family in rice.. Genome-wide identification and expression pattern of drought-responsive members of the NAC family in maize.

Genome-wide analysis and expression patterns of lipid phospholipid phospholipase gene family in Brassica napus L.

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A genome-wide analysis is a crucial method for clarifying the biological functions of the LPP family associates in a particular plant species. So far, there is no comprehensive study of the LPP gene family in rape- seed. The accessibility of the whole rapeseed genome permits the genome-wide characterization of the LPP family genes, which may further be used for rapeseed improvement..

Genome-wide analysis of the citrus B3 superfamily and their association with somatic embryogenesis

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Conclusions: This study provides a genome-wide analysis of the citrus B3 superfamily, including its genome organization, evolutionary features and expression profiles, and identifies specific family members that may be associated with SE..

Genome-wide identification and transcriptional characterization of DNA methyltransferases conferring temperaturesensitive male sterility in wheat

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In this study, DNA methyltransferase (DMT) genes in wheat ( Triticum aestivum L.) based on genome-wide levels were identified and transcriptionally characterized to assess the regulation of DMT genes in the fertility of the temperature-sensitive genic male sterile (TGMS) wheat line BS366.

Genome-wide analysis of the bZIP gene family in Chinese jujube (Ziziphus jujuba Mill.)

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Genome-wide analysis of the bHLH gene family in Chinese jujube (Ziziphus jujuba mill.) and wild jujube. Guo AY, Zhu QH, Chen X, et al. Xue C, Li H, Liu Z, et al. Genome-wide analysis of the WRKY gene family and their positive responses to phytoplasma invasion in Chinese jujube.

Genome-wide identification and expression analysis of PUB genes in cotton

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Genome-wide survey and expression analysis of the PUB family in Chinese cabbage (Brassica rapa ssp. Genome sequence of the cultivated cotton Gossypium arboreum.. Evolution of the protein repertoire. Selection in the evolution of gene duplications. Genome-wide identification and analysis of the stress-resistance function of the TPS (Trehalose- 6-phosphate synthase) gene family in cotton. Identification and expression profile analysis of the protein kinase gene superfamily in maize development.

Genome-wide small RNA profiling reveals tiller development in tall fescue (Festuca arundinacea Schreb)

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Genome-wide small RNA profiling reveals tiller development in tall fescue ( Festuca arundinacea Schreb). Background: Tall fescue (Festuca arundinacea Schreb.) is a major cool-season forage and turfgrass species. In this study, a genome-wide small RNA profiling was carried out in two tall fescue genotypes contrasting for tillering production. Furthermore, 18 miRNAs were involved in tall fescue tiller development process.

Genome-wide identification of the histone acetyltransferase gene family in Triticum aestivum

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Genome-wide identification and analysis of the Populus trichocarpa TIFY gene family. Expansion of the receptor-like kinase/Pelle gene family and receptor-like proteins in Arabidopsis. Genome-wide analysis of the YABBY transcription factor family in pineapple and functional identification of AcYABBY4 involvement in salt stress. The roles of histone acetylation in seed performance and plant development.

Genome-wide identification, characterization, and expression analysis of the NAC transcription factor family in orchardgrass (Dactylis glomerata L.)

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Genome-wide analysis of the NAC transcription factor family in broomcorn millet (Panicum miliaceum L.) and expression analysis under drought stress. Genome-wide analyses of the NAC transcription factor gene family in pepper (Capsicum annuum L. Genome-wide investigation of the NAC transcription factor family in melon (Cucumis melo L.) and their expression analysis under salt stress. Genome- wide identification and expression analysis of the NAC transcription factor family in cassava.

Genome-wide investigation of calciumdependent protein kinase gene family in pineapple: Evolution and expression profiles during development and stress

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Genome-wide identification and expression analysis of calcium-dependent protein kinase and its closely related kinase genes in Capsicum annuum.. Genome-wide survey indicates diverse physiological roles of the barley (Hordeum vulgare L.) calcium-dependent protein kinase genes. Genome-wide identification and expression analysis of calcium-dependent protein kinase in maize. Genome-wide identification of the maize calcium-dependent protein kinase gene family.