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Genome-wide analysis

Tìm thấy 18+ kết quả cho từ khóa "Genome-wide analysis"

A genome-wide analysis of the phospholipid: Diacylglycerol acyltransferase gene family in Gossypium

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Previously, a genome-wide analysis of eudicots found 6 PDATs in Gossypium raimondii (two each in clades V, VI, and VII) [16]. To further understand the complexity of PDATs and TAG biosynthetic mechanisms in cotton, we performed a comprehensive genome-wide analysis of the PDAT gene family in cotton in the present study.. Genome-wide identification and phylogenetic tree analysis of PDAT genes. This classified PDAT genes into 3 subfamilies.

Genome-wide analysis of GRAS transcription factor gene family in Gossypium hirsutum L.

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Genome-wide identification, evolutionary analysis, and stress responses of the GRAS gene family in Castor beans. Genome-wide analysis of the GRAS gene family in rice and Arabidopsis. Homology-based analysis of the GRAS gene family in tobacco. Genome-wide comparative analysis of the GRAS gene family in Populus, Arabidopsis and Rice. Genome-wide analysis of the GRAS gene family in Chinese cabbage (Brassica rapa ssp.

Genome-wide analysis of the bHLH gene family in Chinese jujube (Ziziphus jujuba Mill.) and wild jujube

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Genome-wide identification and characterization of the potato bHLH transcription factor family. Genome-wide analysis of bHLH transcription factor and involvement in the infection by yellow leaf curl virus in tomato ( Solanum lycopersicum. Genome-wide classification and evolutionary analysis of the bHLH family of transcription factors in Arabidopsis, poplar, rice, moss, and algae.

Genome-wide analysis and expression patterns of lipid phospholipid phospholipase gene family in Brassica napus L.

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A genome-wide analysis is a crucial method for clarifying the biological functions of the LPP family associates in a particular plant species. So far, there is no comprehensive study of the LPP gene family in rape- seed. The accessibility of the whole rapeseed genome permits the genome-wide characterization of the LPP family genes, which may further be used for rapeseed improvement..

Genome-wide analysis of the citrus B3 superfamily and their association with somatic embryogenesis

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Conclusions: This study provides a genome-wide analysis of the citrus B3 superfamily, including its genome organization, evolutionary features and expression profiles, and identifies specific family members that may be associated with SE..

Genome-wide analysis of AP2/ERF superfamily in lotus (Nelumbo nucifera) and the association between NnADAP and rhizome morphology

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Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera. Genome-wide analysis of the AP2/ERF gene family in Populus trichocarpa. Genome-wide investigation of the AP2/ERF gene family in tartary buckwheat (Fagopyum Tataricum). Orchestration of the floral transition and floral development in Arabidopsis by the bifunctional transcription factor APETALA2.

Genome-wide analysis of MYB transcription factors of Vaccinium corymbosum and their positive responses to drought stress

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A systems-oriented analysis of the grapevine R2R3-MYB transcription factor family uncovers new insights into the regulation of stilbene accumulation.. Genome-wide analysis and expression profile of the bZIP transcription factor gene family in grapevine (Vitis vinifera). Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana. Genome-wide analysis of the MYB transcription factor superfamily in soybean.

CNCC: An analysis tool to determine genome-wide DNA break end structure at single-nucleotide resolution

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However, genome-wide analysis of the resulting end structures has not been investigated following these sequencing methods.. Results: To address this analysis gap, we develop the use of a coverage-normalized cross correlation analysis (CNCC) to process the high-precision genome-wide break mapping data, and determine genome-wide break end structure distributions at single-nucleotide resolution.

Genome-wide identification, characterization and expression analysis of the non-specific lipid transfer proteins in potato

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Expression and genome-wide analysis of the Xylogen-type gene family

Genome-wide identification and expression analysis of AP2/ERF transcription factors in sugarcane (Saccharum spontaneum L.)

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Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera. Genome-wide identification of AP2/ERF superfamily genes and their expression during fruit ripening of Chinese jujube. Genome-wide analysis of the AP2/ERF gene family in maize waterlogging stress response. Genome-wide analysis of the AP2/ERF gene family in Populus trichocarpa. Discovery and expression profile analysis of AP2/ERF family genes from Triticum aestivum.

Genome-wide identification and expression analysis of expansin gene family in common wheat (Triticum aestivum L.)

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Results: Genome-wide analysis identified 241 expansin genes in the wheat genome, which were grouped into three subfamilies (EXPA, EXPB and EXLA) by phylogenetic tree. The transcriptome map and qRT-PCR analysis found that wheat expansin genes had tissue/organ expression specificity and preference, and generally highly expressed in the roots.

Genome-wide identification and expression analysis of the NAC transcription factor family in tomato (Solanum lycopersicum) during aluminum stress

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Genome- wide identification and expression analysis of the NAC transcription factor family in cassava. Tobacco transcription factors: novel insights into transcriptional regulation in the Solanaceae. Genome-wide analysis of NAC transcription factor family in rice.. Genome-wide identification and expression pattern of drought-responsive members of the NAC family in maize.

Genome-wide identification, molecular evolution, and expression analysis provide new insights into the APETALA2/ethylene responsive factor (AP2/ERF) superfamily in Dimocarpus longan Lour

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Genome-wide identification and phylogenetic analysis of the ERF gene family in cucumbers. Genome-wide analysis of the AP2/ERF gene family in maize waterlogging stress response. Genome-wide analysis of the AP2/. Genome-wide investigation of the AP2/ERF gene family in tartary buckwheat (Fagopyum Tataricum). Complexity of the alternative splicing landscape in plants

Genome-wide identification, phylogeny, and expression analysis of the SBP-box gene family in Euphorbiaceae

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Genome-wide identification and analysis of the SBP-box family genes in apple (Malus x domestica Borkh.. Genome-wide analysis of the SPL family transcription factors and their responses to abiotic stresses in maize. Draft genome sequence of the oilseed species Ricinus communis. Genome-wide identification and evolutionary analysis of the SBP-box gene family in castor bean. A genome triplication associated with early diversification of the core eudicots.

Genome-wide identification and transcript analysis of TCP transcription factors in grapevine

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Identification and transcript analysis of the TCP transcription factors in the diploid woodland strawberry Fragaria vesca. Genome-wide analysis of the TCP gene family in Switchgrass (Panicum virgatum L. The genome of the domesticated apple (Malus × domestica Borkh.).

Genome-wide identification and analysis of WD40 proteins in wheat (Triticum aestivum L.)

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Genome-wide identification and characterization of WD40 protein genes in the silkworm, bombyx mori. Genome-wide characterization, identification, and expression analysis of the WD40 protein family in cotton.. Genome-wide analysis of the WD- repeat protein family in cucumber and Arabidopsis. Food and Agriculture Organization of the United Nations. A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome.

Genome-wide comparison reveals divergence of cassava and rubber aquaporin family genes after the recent whole-genome duplication

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Polyploidy or WGD, multiplication of the whole genome content, is an important evolutionary force that acts as a major mechanism for acquiring new genes. Up to date, genome-wide analysis of the AQP gene family has been reported in most of these species with the exception of cassava. In this study, we present a genome-wide survey and characterization of AQP family genes in cassava. Compared with other examined species, species-spe- cific gene expansion or loss was observed in cassava.

Genome-wide characterization and evolutionary analysis of heat shock transcription factors (HSFs) to reveal their potential role under abiotic stresses in radish (Raphanus sativus L.)

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Genome- wide identification, classification and expression analysis of the heat shock transcription factor family in Chinese cabbage. Genome-wide identification and comparative analysis of the heat shock transcription factor family in Chinese white pear (Pyrus bretschneideri) and five other Rosaceae species. Genome-wide analysis of the heat shock transcription factors in Populus trichocarpa and Medicago truncatula.

Genome-wide analysis of the NAC transcription factor family in broomcorn millet (Panicum miliaceum L.) and expression analysis under drought stress

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Genome-wide analysis, expansion and expression of the NAC family under drought and heat stresses in bread wheat (T. Genome-wide sequence and expression analysis of the NAC transcription factor family in polyploid wheat. Genome- wide analysis of the NAC transcription factor family in Tartary buckwheat (Fagopyrum tataricum). Genome-wide identification and expression pattern of drought-responsive members of the NAC family in maize.

Genome-wide analysis of the bZIP gene family in Chinese jujube (Ziziphus jujuba Mill.)

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Genome-wide analysis of the bHLH gene family in Chinese jujube (Ziziphus jujuba mill.) and wild jujube. Guo AY, Zhu QH, Chen X, et al. Xue C, Li H, Liu Z, et al. Genome-wide analysis of the WRKY gene family and their positive responses to phytoplasma invasion in Chinese jujube.