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Gut microbiome

Tìm thấy 15+ kết quả cho từ khóa "Gut microbiome"

The seasonal changes of the gut microbiome of the population living in traditional lifestyles are represented by characteristic species-level and functionallevel SNP enrichment patterns

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The whole metagenomic sequencing data of Haza human gut microbiomes was downloaded from the NCBI SRA database with the accession number SRA582120.. The impact of the gut microbiota on human health: an integrative view. Our gut microbiome: the evolving inner self. Antibiotics and the human gut microbiome: Dysbioses and accumulation of resistances. Diet and the human gut microbiome: an international review. Influence of diet on the gut microbiome and implications for human health.

Metagenomic data-mining reveals enrichment of trimethylamine-N-oxide synthesis in gut microbiome in atrial fibrillation patients

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Dynamics and stabilization of the human gut microbiome during the first year of life. Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease

The effect of antibiotics on the gut microbiome: A metagenomics analysis of microbial shift and gut antibiotic resistance in antibiotic treated mice

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The initial objectives of the work include tracking the evolution of resistance of the pathogens in the bladder and characterizing the similarities and differences in in- fluence of antibiotics with differing mechanisms of ac- tion on the gut resistome and community composition.. While work about the first objective was published else- where [38], this manuscript reports findings about the second objective and characterizes the changes in the gut microbiome.

Immune challenge reduces gut microbial diversity and triggers fertility-dependent gene expression changes in a social insect

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However, the immune challenge had a severe impact on the gut microbiome by slashing micro- bial diversity, and these changes in the composition of the gut microbiome were linked to the expression of import- ant immune genes.. After 24 h, we removed the fat body and gut of the focal workers (N = 32) to analyse gene expression via RNAseq and the gut microbiome community by 16S sequencing..

High-throughput sequencing reveals the core gut microbiota of the mud crab (Scylla paramamosain) in different coastal regions of southern China

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Gut Microbiota Effect, a Review. Rizzetto L, Fava F, Tuohy KM, et al. Qin N, Yang F, Li A, et al. Alterations of the human gut microbiome in liver cirrhosis. Meijnikman AS, Gerdes VE, Nieuwdorp M, et al. Han H, Li Y, Fang J, et al. Gut Microbiota and Type 1 Diabetes. Cheung MK, Yip HY, Nong W, et al. Rapid change of microbiota diversity in the gut but not the Hepatopancreas during gonadal development of the new shrimp model Neocaridina denticulata. Olmos J, Ochoa L, Paniagua-Michel J, et al.

Analysis of the fecal microbiota of fast- and slow-growing rainbow trout (Oncorhynchus mykiss)

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Human genetics shape the gut microbiome. Unravelling the effects of the environment and host genotype on the gut microbiome. Analysis of the gut and gill microbiome of resistant and susceptible lines of rainbow trout (Oncorhynchus mykiss). The gut microbiota of marine fish. Relationship between the gut microbiome and brain function. Characterization of the gut microbiota of three commercially valuable warmwater fish species

Distinct microbial assemblages associated with genetic selection for high- and lowmuscle yield in rainbow trout

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The biogeography of the Atlantic salmon (Salmo salar) gut microbiome. The role of the gut microbiome on skeletal muscle mass and physical function: 2019 update. Dietary changes in nutritional studies shape the structural and functional composition of the pigs' fecal microbiome-from days to weeks. Haluzík, M.: The role of bile acids in metabolic regulation

Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces

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The role of the canine gut microbiome and Metabolome in health and gastrointestinal disease. https://doi.org/10.3389/fvets . Role of the gastrointestinal microbiota in small animal health and disease. https://doi.. org/10.1136/vr.103826.. https://doi.org/10.1002/vms3.17.. https://doi.org/10.3748/wjg.v20.i44.16489.. Similarity of the dog and human gut microbiomes in gene content and response to diet. https://doi.org/10.1186/s .

Host DNA contents in fecal metagenomics as a biomarker for intestinal diseases and effective treatment

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Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn’s Disease. Reciprocal interactions of the intestinal microbiota and immune system. The role of the immune system in governing host-microbe interactions in the intestine

Hierarchical non-negative matrix factorization using clinical information for microbial communities

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Enterotypes of the human gut microbiome. Temporal dynamics of the human vaginal microbiota

Genome of the webworm Hyphantria cunea unveils genetic adaptations supporting its rapid invasion and spread

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Comparative shotgun metagenomic data of the silkworm Bombyx mori gut microbiome. Metagenomic insights into metabolic capacities of the gut microbiota in a fungus- cultivating termite (Odontotermes yunnanensis). Gene expression analysis in the larval silk gland of the eri silkworm Samia ricini. Temperature profiles inside webs of the fall webworm, Hyphantria cunea (Lepidoptera: Arctiidae): Influence of weather, compass orientation, and time of day.

Assessing the performance of different approaches for functional and taxonomic annotation of metagenomes

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Metagenomic datasets can be found in the SRA archive with accession SRP104009 (Thermal dataset), SRS052697 (Gut dataset).. Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease

Leishmania infection induces a limited differential gene expression in the sand fly midgut

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The gut microbiome of the vector Lutzomyia longipalpis is essential for survival of Leishmania infantum. Juvenile hormone and juvenile hormone esterase in adult females of the mosquito Aedes aegypti. Regulation of the gut-specific carboxypeptidase: a study using the binary Gal4/UAS system in the mosquito Aedes aegypti. The role of promastigote secretory gel in the origin and transmission of the infective stage of Leishmania mexicana by the sandfly Lutzomyia longipalpis.

Clonal reconstruction from time course genomic sequencing data

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Structure, function and diversity of the healthy human microbiome. Dynamics of the human gut microbiome in inflammatory bowel disease.

Gene expression within the periaqueductal gray is linked to vocal behavior and earlyonset parkinsonism in Pink1 knockout rats

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The nasal and gut microbiome in Parkinson's disease and idiopathic rapid eye movement sleep behavior disorder. DJ-1, a cancer- and Parkinson's disease-associated protein, stabilizes the antioxidant transcriptional master regulator Nrf2. Polyamine pathway contributes to the pathogenesis of Parkinson disease.. Parkinson disease-associated DJ-1 is required for the expression of the glial cell line-derived neurotrophic factor receptor RET in human neuroblastoma cells.

Gut microbiota in children with juvenile idiopathic arthritis: Characteristics, biomarker identification, and usefulness in clinical prediction

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Microbiome analytics of the gut microbiota in patients with juvenile idiopathic arthritis: a longitudinal observational cohort study. https://doi.org/10.1002/art.40827.. doi.org/10.1038/nm.3914.. https://doi.org/10.1038/s x..

Transcriptome and microbiome of coconut rhinoceros beetle (Oryctes rhinoceros) larvae

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The results of the metagenomic microbiome analysis are as follows. 90% similar to any in the NCBI 16S rDNA database and likely representing genera new to science. Table 1 Microbial Taxa in the Oryctes rhinoceros Fat Body, Gut contents, and Surroundings. If the OTU was also found in the deionized water (diH2O) negative control, the number of reads is given. OTUs found only in the control were omitted to save space. The latter was also found in the negative control, however..

Phylogenomics of expanding uncultured environmental Tenericutes provides insights into their pathogenicity and evolutionary relationship with Bacilli

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It remains to be determined whether these novel lineages found in the human gut are linked to the maintenance of gut homeostasis and microbiome func- tion.

Meta-Apo improves accuracy of 16Samplicon-based prediction of microbiome function

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Therefore, Meta-Apo allows microbiome diagnosis that crosses the amplicon and WGS platforms.. To quantitatively assess the benefits of using Meta- Apo-calibrated 16S-amplicon-derived functional profiles for diagnosis, we performed a Microbiome Search En- gine (MSE) based gingivitis classification [20, 21].

The use of taxon-specific reference databases compromises metagenomic classification

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Metagenome sequencing of the Hadza hunter-gatherer gut microbiota. https://doi.org