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Long noncoding RNAs

Tìm thấy 15+ kết quả cho từ khóa "Long noncoding RNAs"

Analysis of histology and long noncoding RNAs involved in the rabbit hair follicle density using RNA sequencing

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Analysis of histology and long noncoding RNAs involved in the rabbit hair follicle density using RNA sequencing. Background: Hair follicle density influences wool fibre production, which is one of the most important traits of the Wan Strain Angora rabbit. However, molecular mechanisms regulating hair follicle density have remained elusive..

Pan-tissue transcriptome analysis of long noncoding RNAs in the American beaver Castor canadensis

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Of the 40 lncRNA contigs for which a high-confidence ortholog gene could be identified, the ortholog annota- tions included 16 long noncoding RNA genes, 12 non- coding antisense RNAs, ten noncoding isoforms of protein-coding genes, and two sense-overlapping RNAs (Table 3).

Genome-wide analysis of long non-coding RNAs in adult tissues of the melon fly, Zeugodacus cucurbitae (Coquillett)

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Genome- wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat. Dynamic expression of long non-coding RNAs (lncRNAs) in adult zebrafish. A long non-coding RNA promotes full activation of adult gene expression in the chicken α -globin domain. Genome-wide identification and functional prediction of long noncoding RNAs involved in the heat stress response in Metarhizium robertsii. Diversity and dynamics of the Drosophila transcriptome.

A transcriptomic profile of topping responsive non-coding RNAs in tobacco roots (Nicotiana tabacum)

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Genome-wide screening and functional analysis identify a large number of long noncoding RNAs involved in the sexual reproduction of rice

Genome-wide detection and sequence conservation analysis of long non-coding RNA during hair follicle cycle of yak

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Systematic Analysis of Non-coding RNAs Involved in the Angora Rabbit (Oryctolagus cuniculus) Hair Follicle Cycle by RNA Sequencing. The seasonal development dynamics of the yak hair cycle transcriptome. Systematic analysis of long noncoding RNAs in the senescence-accelerated mouse prone 8 brain using RNA sequencing. Comparative expression dynamics of Intergenic long noncoding RNAs in the genus drosophila. Whales originated from aquatic artiodactyls in the Eocene epoch of India

Identification and analysis of long noncoding RNAs that are involved in inflammatory process in response to transmissible gastroenteritis virus infection

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Identification and analysis of long non- coding RNAs that are involved in. A total of 106 lncRNAs were differentially expressed. Many differentially expressed lncRNAs act as elements to competitively attach microRNAs (miRNAs) which target to messenger RNA (mRNAs) to mediate expression of genes that related to toll- like receptors (TLRs), NOD-like receptors (NLRs), tumor necrosis factor (TNF), and RIG-I-like receptors (RLRs) pathways..

The landscape of lncRNAs in Cydia pomonella provides insights into their signatures and potential roles in transcriptional regulation

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To inspect the distribution of lncRNAs across different chromosomes, we generated a circular plot to obtain a. 1 Classification of codling moth lncRNAs and summary of lncRNAs reported in other insect species. a Pie chart displaying the composition of three classes of lncRNAs: long intergenic noncoding RNAs (lincRNA), intronic long noncoding RNAs (ilncRNA) and long noncoding natural antisense transcripts (lncNAT)..

Genome‑wide integrated analysis demonstrates widespread functions of lncRNAs in mammary gland development and lactation in dairy goats

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Global intersection of Long non-coding RNAs with processed and unprocessed Pseudogenes in the human genome. Transcriptome analysis of the mammary gland from GH transgenic goats during involution. Genes regulating lipid and protein metabolism are highly expressed in mammary gland of lactating dairy goats. Screening and evaluating of long noncoding RNAs in the puberty of goats..

Identification and analysis of long noncoding RNAs and mRNAs in chicken macrophages infected with avian infectious bronchitis coronavirus

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The expression of non-coding RNAs (ncRNAs) in cells is closely related to the stage of virus infection [13]. RNA libraries establishment and lncRNA identification Total RNA was extracted from 36 h post-infected HD11 cells (Exp 1, 2, and 3) and mock-infected cells (CK 1, 2, and 3). 1 Indirect immunofluorescence assay (IFA) of HD11 cells infected by IBV.

Identify RNA-associated subcellular localizations based on multi-label learning using Chou’s 5-steps rule

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Lncatlas database for subcellular localization of long noncoding rnas.. The lncLocator: a subcellular localization predictor for long non-coding RNAs based on a stacked ensemble classifier. https://doi.org/. Prediction of microrna subcellular localization by using a sequence-to-sequence model.

Integrated analysis of lncRNA, miRNA and mRNA reveals novel insights into the fertility regulation of large white sows

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Roles of miRNAs and long noncoding RNAs in the progression of diabetic retinopathy. Analyses of long non-coding RNA and mRNA profiling in the spleen of diarrheic piglets caused by Clostridium perfringens type C. Genome-wide analysis of miRNAs in the ovaries of Jining Grey and Laiwu black goats to explore the regulation of fecundity. Systematic analysis of long non- coding RNAs and mRNAs in the ovaries of Duroc pigs during different follicular stages using RNA sequencing.

LncRNAs and their regulatory networks in breast muscle tissue of Chinese Gushi chickens during late postnatal development

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Although many genes play important roles in chicken muscle growth, studies have shown that only a small percentage (1–2%) of the genome encodes proteins in mammals, and tens of thousands of intergenic sites are transcribed into noncoding RNA [9]. In the past few years, regulatory RNAs, such as miRNAs, piRNAs, snoRNAs, and long noncoding RNAs (lncRNAs), have appeared to play roles in many important biological processes [10].

Comparative transcriptome analysis uncovers regulatory roles of long noncoding RNAs involved in resistance to powdery mildew in melon

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To investigate the potential roles of lncRNAs in resisting to PM in melon, it is necessary to identify lncRNAs and uncover their molecular functions. Results: It is reported that 11,612 lncRNAs were discovered, which were distributed across all 12 melon. In addition, a total of 407 and 611 lncRNAs were found to be differentially expressed after PM infection in PM-susceptible...

Transcriptome analysis of the transdifferentiation of canine BMSCs into insulin producing cells

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Genome-wide analysis reveals changes in long noncoding RNAs in the differentiation of canine BMSCs into insulin-producing cells. Mesenchymal stem cells. Stem cells in the treatment of diabetes mellitus - focus on mesenchymal stem cells. Stem Cells Int. in mice with an inducible adipocyte-specific deletion of the insulin receptor. Differentiation of human embryonic stem cells into insulin-producing clusters. Stem cells (Dayton, Ohio).

Genome-wide methylation and transcriptome of blood neutrophils reveal the roles of DNA methylation in affecting transcription of protein-coding genes and miRNAs in E. coli-infected mastitis cows

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Integrated analysis of mRNAs and long noncoding RNAs in the semen from Holstein bulls with high and low sperm motility

Long noncoding RNAs in lipid metabolism: Literature review and conservation analysis across species

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Regulation of the apolipoprotein gene cluster by a long noncoding RNA.. Qin W, Li X, Xie L, Li S, Liu J, Jia L, et al. Zhao X-Y, Li S, DelProposto JL, Liu T, Mi L, Porsche C, et al. Polycarpou-Schwarz M, Groß M, Mestdagh P, Schott J, Grund SE, Hildenbrand C, et al. Cao C, Fan R, Zhao J, Zhao X, Yang J, Zhang Z, et al. Reddy MA, Chen Z, Park JT, Wang M, Lanting L, Zhang Q, et al. Yang L, Li P, Yang W, Ruan X, Kiesewetter K, Zhu J, et al. Liu C, Yang Z, Wu J, Zhang L, Lee S, Shin D-J, et al.

Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting soybean genotypes subjected to phosphate starvation

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Long noncoding RNAs (lncRNAs) have recently been reported to be key regulators in the responses of plants to stress conditions, but the mechanism through which LP stress mediates the biogenesis of lncRNAs in soybean remains unclear.. GO and KEGG analyses indicated that numerous DE lncRNAs might be involved in diverse.

Differential expression of miRNAs in the presence of B chromosome in the cichlid fish Astatotilapia latifasciata

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Thus, the impact of B chromosome duplications in the small noncoding RNAs expression is poorly understood.. Teleost fishes are important for evolutionary studies, especially in the Cichlidae family, due to their rapid adaptive radi- ation in East African great lakes [30–32]. Repetitive elements [9], coding genes [11] and a long noncoding RNA [19] have already been identified in the B chromosome of A.

Identification of long noncoding natural antisense transcripts (lncNATs) correlated with drought stress response in wild rice (Oryza nivara)

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Identification of long noncoding natural antisense transcripts (lncNATs) correlated with drought stress response in wild rice ( Oryza nivara. Drought stress is one of the most severe abiotic stresses affecting rice growth and production. Adaptation to drought stress involves a cascade of genes and regulatory factors that form complex networks.

Genome-wide identification and functional prediction of long non-coding RNAs in Sprague-Dawley rats during heat stress

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The long noncoding RNA NEAT1 and nuclear paraspeckles are up- regulated by the transcription factor HSF1 in the heat shock response. A long noncoding RNA acts as a post- transcriptional regulator of heat shock protein (HSP70) synthesis in the cold hardy Diamesa tonsa under heat shock. Identification of long non-coding RNAs in the immature and mature rat anterior pituitary.