Có 13+ tài liệu thuộc chủ đề "Biological processes"
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Differential expression of miRNAs in the presence of B chromosome in the cichlid fish Astatotilapia latifasciata. These advances allow analyses of DNA, RNA, proteins and the construction of interactive networks for understanding the B composition and behavior in the cell. Results: We identified 727 miRNA precursors in the A. These miRNAs share common targets in the brain, muscle and gonads....
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In Bombyx mori, autophagy is induced by 20E in the larval fat body. Results: RNA libraries from the fat body of B. These results indicated that LNC_000560 was potentially involved in the 20E-induced autophagy of the fat body by regulating Atg4B.. Conclusions: This study provides the genome-wide identification and functional characterization of lncRNAs associated with 20E-induced autophagy in the fat...
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KSP: an integrated method for predicting catalyzing kinases of phosphorylation sites in proteins. KSP constructs a network based on known protein-protein interactions and kinase-substrate relationships. Based on the network, it computes an affinity score between a phosphorylation site and kinases, and returns the top-ranked kinases of the score as candidate catalyzing kinases. When tested on known kinase-substrate pairs, KSP outperforms...
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However, the evolution and functional divergence of the LBD gene family has not yet been characterized for the Chinese White Pear.. Synteny analysis results indicated that segmental duplication played a key role in the expansion of the PbrLBD gene family.. Furthermore, PbrLBD20 , one of the candidate genes related to anthocyanins was localized in the nucleus.. Conclusions: Our analysis provides...
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Genome-wide analysis of the NF-Y gene family in peach ( Prunus persica L.). Based on an analysis of the phylogenetic relationships among peach NF-Ys , six pairs of paralogous NF-Ys were detected. The expansion of the peach NF-Y family occurred by segmental and tandem duplication. This dimer is transferred into the nucleus, where it interacts with NF-YA to complete the...
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The polish wheat ( Triticum polonicum L.) TpSnRK2.10 and TpSnRK2.11 meditate the accumulation and the distribution of cd and Fe in transgenic Arabidopsis plants. However, the functions of their homologs, TpSnRK2.10 and TpSnRK2.11 from dwarf Polish wheat are unknown.. Results: TpSnRK2.11 encodes a cytoplasmic protein. TpSnRK2.10 and TpSnRK2.11 have different expression patterns at different growth stages. Expression of TpSnRK2.10 increased...
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expression profiling of SWEET genes in. However, there has been no comprehensive analysis of the SWEET family genes in Brassica oleracea (BoSWEET), and the evolutionary pattern, phylogenetic relationship, gene characteristics of BoSWEET genes and their expression patterns under biotic and abiotic stresses remain largely unexplored.. Results: A total of 30 BoSWEET genes were identified and divided into four clades in...
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semilaevis to different levels of salinity, we performed RNA-seq analysis of the liver to identify the genes and molecular and biological processes involved in responding to salinity changes.. The half-smooth tongue sole (Cynoglossus semilaevis) is a euryhaline fish species that can survive in a wide range of salinities range from 14 to 37 ppt (parts per thousand) [4]. The fish...
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CrusTF: a comprehensive resource of transcriptomes for evolutionary and functional studies of crustacean. With the rapid development of crustacean aquaculture and biodiversity loss, understanding the gene regulatory mechanisms of growth, reproduction, and development of crustaceans is crucial to both aquaculture development and biodiversity conservation of this group of organisms. However, crustacean transcription factors are still largely unknown, because the lack...