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Chủ đề : Candidate gene


Có 11+ tài liệu thuộc chủ đề "Candidate gene"

Identification of loci and candidate gene GmSPX-RING1 responsible for phosphorus efficiency in soybean via genome-wide association analysis

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Identification of loci and candidate gene GmSPX-RING1 responsible for phosphorus efficiency in soybean via genome-wide association analysis. One SNP AX-93932874 was detected within 5 ′ -untranslated region of Glyma.10 g018800, which contained SPX and RING domains and was named as GmSPX-RING1. Furthermore, the function research of GmSPX-RING1 was carried out in soybean hairy root transformation.. Compared with their respective controls,...

Identification of a quantitative trait loci (QTL) associated with ammonia tolerance in the Pacific white shrimp (Litopenaeus vannamei)

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Identification of a quantitative trait loci (QTL) associated with ammonia tolerance in the Pacific white shrimp ( Litopenaeus vannamei. Background: Ammonia is one of the most common toxicological environment factors affecting shrimp health.. Results: In this study, we constructed a high-density genetic map of the Pacific white shrimp (Litopenaeus. The constructed genetic map contained 17,338 polymorphic markers spanning 44 linkage...

The genetic regulation of size variation in the transcriptome of the cerebrum in the chicken and its role in domestication and brain size evolution

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The genetic regulation of size variation in the transcriptome of the cerebrum in the chicken and its role in domestication and brain size evolution. Background: Large difference in cerebrum size exist between avian species and populations of the same species and is believed to reflect differences in processing power, i.e. in the speed and efficiency of processing information in this...

Map-based cloning and characterization of BoCCD4, a gene responsible for white/ yellow petal color in B. oleracea

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Map-based cloning and characterization of BoCCD4 , a gene responsible for white/. yellow petal color in B. oleracea cultivars, enabling the study of the genetic basis of this trait. Results: In the present study, we report that the candidate gene was further delineated to a 207-kb fragment.. BoCCD4, a homolog of the Arabidopsis carotenoid cleavage dioxygenase 4 (CCD4) gene, was...

A high-density genetic map developed by specific-locus amplified fragment (SLAF) sequencing and identification of a locus controlling anthocyanin pigmentation in stalk of Zicaitai (Brassica rapa L. ssp. chinensis var. purpurea)

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A high-density genetic map developed by specific-locus amplified fragment (SLAF) sequencing and identification of a locus controlling anthocyanin pigmentation in stalk of Zicaitai ( Brassica rapa L. The aim of this study is to construct a high density genetic map using the specific length amplified fragment sequencing (SLAF-seq) technique to explore genetic basis for anthocyanin pigmentation traits via quantitative trait...

Combining QTL-seq and linkage mapping to fine map a wild soybean allele characteristic of greater plant height

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We identified a QTL for PH in a 1.73 Mb region on soybean chromosome 13 through QTL-seq, which was confirmed by SSR marker-based classical QTL mapping in the mapping population.. RT-PCR and sequence analysis of possible candidate genes showed that Glyma.13 g249400 revealed significantly higher expression in higher PH genotypes, and the gene existed 6 differences in the amino acids...

A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

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A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp ( Cyprinus carpio haematopterus. The Yangtze River common carp (Cyprinus carpio haematopterus) is one of the most important aquacultured strains in China. Results: A high-resolution genetic linkage map was constructed by using 7820 2b-RAD (2b-restriction site-associated DNA) and 295 microsatellite...

Transcriptome profiling of two maize inbreds with distinct responses to Gibberella ear rot disease to identify candidate resistance genes

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Background: Gibberella ear rot (GER) is one of the most economically important fungal diseases of maize in the temperate zone due to moldy grain contaminated with health threatening mycotoxins. Results: RNA-Seq-derived transcriptome profiles of fungal- and mock-inoculated developing kernel tissues of two maize inbred lines were used to identify differentially expressed transcripts and propose candidate genes mapping within GER resistance...

Genome-wide association analysis and QTL mapping reveal the genetic control of cadmium accumulation in maize leaf

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A genome-wide association study (GWAS) was conducted in a population of 269 maize accessions with 43,737 single nucleotide polymorphisms (SNPs) to identify candidate genes and favorable alleles for controlling Cd accumulation in maize.. The significant SNP (SYN25051) at position could explained 27.1% of the phenotype variation. Conclusions: Our findings provide new insights into the genetic control of Cd accumulation and...