Có 16+ tài liệu thuộc chủ đề "Genetic variation"
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Analyses of the major genetic changes over the last 27 years revealed the selection pressure on orthologs of the gibberellin biosynthesis-related GA2 gene and the senescence-associated SAG12 gene. Full list of author information is available at the end of the article. which is an important cereal crop grown worldwide on 220 million ha, accounts for 20% of the total calories...
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However, the underlying mechanisms of the RGA remain poorly understood, especially in apple rootstocks. https://doi.org/10.1186/s . The RGA of the hybrids segregated significantly by Table S1). 296 (10.39. Of the 60 DEGs in the plant hormone signalling pathway, 30 were involved in auxin signalling (Table S7). 1 Verification of the allelic variations in the promoter of MdLAZY1 and functional analysis...
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The aims of this study were to identify quantitative trait loci (QTLs) and to develop genomics-assisted prediction models for salt, alkali, and salt-alkali tolerance in apple rootstock.. pumila Mill., sensitive) were used to identify 17, 13, and two QTLs for injury indices of salt, alkali, and salt – alkali stress via bulked segregant analysis. The genomic predicted value of an...
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Moreover epigenetic marks, in particular the DNA methylation state, of specific loci are driven by genetic variation. In this sense, polymorphism with major gene effects on metabolic and cell signaling processes, like the variation of the ryanodine receptors in skeletal muscle, may affect DNA methylation.. Methods: DNA-Methylation profiles were generated applying Reduced Representation Bisulfite Sequencing (RRBS) on 17 Musculus longissimus...
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Results: We proposed a deep learning framework to integrate sequence information and chromatin accessibility data for the accurate prediction of modification sites specific to different histone markers. Besides, sequence signatures automatically extracted by our method was consistent with known transcription factor binding sites, thereby giving insights into regulatory signatures of histone modifications. As an application, our method was shown to...
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are necrotrophic bacterial plant pathogens of the family Pectobacteriaceae, responsible for a wide spectrum of diseases of important crops and ornamental plants including soft rot, blackleg, and stem wilt. are necrotrophic bacterial plant pathogens of the family Pectobacteriaceae, responsible for a wide spectrum of diseases (including soft rot, blackleg, and stem wilt) of important crops and orna- mental plants worldwide...
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Next-generation sequencing library construction on a surface. Over the past decade, the NGS pipeline has been steadily improved, and the entire process is currently relatively straightforward. Herein, we present a simple but robust approach to streamline library preparation by utilizing surface bound transposases to construct DNA libraries directly on a flowcell surface.. Results: The surface bound transposases directly fragment genomic...
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CNVs can be generated by different recombination mechanisms, such as non-allelic homologous recombination, that rely on specific characteristics of the genome architecture. We successfully validated 93.75% of the CNVs tested by qPCR, which were sampled at different frequencies and sizes. A mother-daughter family structure allowed for the evaluation of the inheritance of a number of these CNVs. Conclusion: Great tit...
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A SNP panel for identification of DNA and RNA specimens. With the increasing interest in RNA expression profiles, we aimed for establishing a SNP panel for both DNA and RNA-based genotyping.. The ability of the SNP panel to uniquely identify individuals on DNA and RNA level was validated in an independent population dataset. Whereas most of the genes containing the...
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PGAP-X: extension on pan-genome analysis pipeline. Four kinds of data analysis modules were developed and integrated: whole genome sequences alignment, orthologous genes clustering, pan-genome profile analysis, and genetic variants analysis. The modules for data visualization in PGAP-X include: comparison of genome structure, gene distribution by conservation, pan-genome profile curve and variation on genic and genomic region. Since the pan-genome concept...
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CLASSIFICATION AND PROPERTIES OF PAINT 3.1 Some basic chemistry. 3.2.1 Physically drying. 3.2.1.1 Solvent-borne paints 3.2.1.2 Waterborne paints 3.2.2 Chemically curing. 3.2.2.1 Oxidative curing 3.2.2.2 Two-component curing 3.2.2.3 Other curing mechanisms 3.3 Classification Diagram. 3.4 Properties of Individual Binder Types 3.4.1 Physically drying. 3.4.1.1 Solvent-borne paints. Tars and Bitumen. 3.4.1.2 Waterborne paints 3.4.2 Chemically curing. Modified Alkyds 3.4.2.2 Two-component curing....
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Saidov et al., 2018).. Mansour et al., 2018). Kanle Satishchandra et al., 2019), as well as solanaceous weeds (Shashank et al., 2018). The interactions between bacterial microorganisms and their hosts are important in terms of the host’s fitness, ecology, and evolutionary biology (Gurung et al., 2019).. Stouthamer et al., 1999). Moran et al., 2008. Charlat et al., 2009. Richardson et...
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doi:10.3906/bot-2104-21. For potential invasiveness, invaders should have numerous characteristics that enable them to spread and proliferate once established such as large seed bank, short generation periods, environmental stress tolerance, and multiple breeding pathways (Li et al., 2019). Ward et al., 2008). the variation in a population is an essential prerequisite for the assessment of alien species in the field (Marczewski...
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Ibro et al., 2014).. About 6.5 million metric tons of cowpea is being produced annually on about 14.5 million hectares worldwide (Boukar et al., 2018). Boukar et al., 2018).. Cowpea is one of the most preferred crops and a valuable component in the farming systems of the majority of resource poor rural households in SSA for its various attributes (Molosiwa...