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Chủ đề : Secondary metabolism


Có 14+ tài liệu thuộc chủ đề "Secondary metabolism"

Physiological and transcriptomic analyses reveal the roles of secondary metabolism in the adaptive responses of Stylosanthes to manganese toxicity

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Physiological and transcriptomic analyses reveal the roles of secondary metabolism in the adaptive responses of Stylosanthes to manganese toxicity. However, little is known about the adaptive responses of stylo to Mn toxicity. Thus, this study integrated both physiological and transcriptomic analyses of stylo subjected to Mn toxicity.. In contrast, the activities of enzymes, such as peroxidase (POD), phenylalanine ammonia-lyase (PAL)...

Transcriptomic analysis reveals the GRAS family genes respond to gibberellin in Salvia miltiorrhiza hairy roots

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Transcriptomic analysis reveals the GRAS family genes respond to gibberellin in Salvia miltiorrhiza hairy roots. Background: Salvia miltiorrhiza is one of the most important traditional Chinese medicinal plants with high medicinal value. Transcriptomic sequencing revealed that many genes involved in the secondary metabolism pathway were the GA-responsive. Thereafter, members of the same subfamily showed similar conserved motifs and gene structures,...

Multi-tissue transcriptome analysis using hybrid-sequencing reveals potential genes and biological pathways associated with azadirachtin A biosynthesis in neem (azadirachta indica)

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After phylogenetic analysis, domain prediction, and molecular docking studies, 22 candidates encoding 2,3-oxidosqualene cyclase (OSC), alcohol dehydrogenase, cytochrome P450 (CYP450), acyltransferase, and esterase were proposed to be potential genes involved in azadirachtin A biosynthesis.. Accuracy of the assembly was verified by quantitative real-time PCR (qRT-PCR) and full-length PCR cloning.. Conclusions: By integrating and analyzing transcriptome data from hybrid-seq technology, 22...

Genomic characteristics and comparative genomics analysis of the endophytic fungus Sarocladium brachiariae

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Genomic characteristics and comparative genomics analysis of the endophytic. brachiariae is 31.86 Mb, with a contig N50 of 3.27 Mb and 9903 protein coding genes. brachiaria has 14.9% more plant cell wall degradation related CAZymes to S. brachiaria had seven fewer terpene gene clusters, including helvolic acid BGC, compared with S. Conclusions: The data provided a better understanding of the...

YPR2 is a regulator of light modulated carbon and secondary metabolism in Trichoderma reesei

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Targets (direct and indirect) of YPR2 overlap with induction specific genes as well as with targets of the carbon catabolite repressor CRE1 and a considerable proportion is regulated by photoreceptors as well. Additionally, YPR2 positively influenced alamethicin levels along with transcript levels of the alamethicin synthase tex1 and is essential for production of orsellinic acid in darkness.. 1 AIT -...

Chromosome rearrangements shape the diversification of secondary metabolism in the cyclosporin producing fungus Tolypocladium inflatum

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Even strains of the same species may exhibit differences in metabolite production, a finding that has important. subtelomeres and uncover a polymorphic cluster present in only two strains that is closely related to the cluster responsible for biosynthesis of the mycotoxin aflatoxin (AF), a highly carcinogenic compound that is a major public health concern worldwide. Full list of author information...

De novo leaf and root transcriptome analysis to explore biosynthetic pathway of Celangulin V in Celastrus angulatus maxim

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Background: Celastrus angulatus Maxim is a kind of crucial and traditional insecticidal plant widely distributed in the mountains of southwest China. angulatus, and 16 unigenes probably involved in the biosynthesis of Celangulin V were finally collected. Celastrus angulatus Maxim, extensively distributed in the mountains of southwest China, have been exploited as natural insecticide resource and folk medicines attributed to their...

Genomic discovery of the hypsin gene and biosynthetic pathways for terpenoids in Hypsizygus marmoreus

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Genomic discovery of the hypsin gene and biosynthetic pathways for terpenoids in Hypsizygus marmoreus. The genome annotation revealed four terpene synthase genes responsible for terpenoid biosynthesis. From the gene tree analysis, we identified that terpene synthase genes can be classified into six clades. Four terpene synthase genes of H. marmoreus belonged to four different groups that implies they may be...

Whole genome and transcriptome analysis reveal adaptive strategies and pathogenesis of Calonectria pseudoreteaudii to Eucalyptus

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is one of the most destructive diseases to affect Eucalyptus nurseries and plantations. pseudoreteaudii, which is one of the most aggressive pathogens in southeast Asia.. Genomic comparisons identified 1785 species-specific gene families in C. RNA-seq showed that 4425 genes were differentially expressed on the eucalyptus(the resistant cultivar E. The annotation of GO term and KEGG pathway indicated that some of...

De novo sequencing, assembly and characterisation of Aloe vera transcriptome and analysis of expression profiles of genes related to saponin and anthraquinone metabolism

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characterisation of Aloe vera transcriptome and analysis of expression profiles of genes related to saponin and anthraquinone. Background: Aloe vera is a perennial, succulent, drought-resistant plant that exhibits many pharmacological characteristics such as wound healing ability against skin burns, anti-ulcer, anti-inflammatory, anti-tumor, anti-viral, anti- hypercholesterolemic, anti-hyperglycemic, anti-asthmatic and much more. Despite great medicinal worth, little genomic information is available on...

Whole-genome sequencing of Aspergillus tubingensis G131 and overview of its secondary metabolism potential

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Whole-genome sequencing of Aspergillus tubingensis G131 and overview of its. tubingensis G131. tubingensis G131.. tubingensis, which is part of the A.. A complete review of the putative SM gene biosynthetic clusters is also reported.. tubingensis G131 produces asperazine and NGPs under laboratory condi- tions. tubingensis G131 genome is robust. tubingensis G131 (35,18 Mb) is equivalent to the genome size of...

Global analysis of prokaryotic tRNA-derived cyclodipeptide biosynthesis

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Global analysis of prokaryotic tRNA-derived cyclodipeptide biosynthesis. Background: Among naturally occurring small molecules, tRNA-derived cyclodipeptides are a class that have attracted attention for their diverse and desirable biological activities. Consequently, it is unclear how many genetically encoded cyclodipeptides represent novel products, and which producing organisms should be targeted for discovery.. We leveraged this tool to conduct a global analysis of...